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Aliases for ENSG00000228452 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000228452 Gene

  • Novel Transcript 5
  • AC098484.1 5

External Ids for ENSG00000228452 Gene

Previous GeneCards Identifiers for ENSG00000228452 Gene

  • GC01M043241

Summaries for ENSG00000228452 Gene

GeneCards Summary for ENSG00000228452 Gene

ENSG00000228452 is an RNA Gene.

Additional gene information for ENSG00000228452 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228452 Gene

Genomics for ENSG00000228452 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228452 Gene

Promoters and enhancers for ENSG00000228452 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J042775 Promoter 0.7 EPDnew 600.7 +1.6 1592 0.1 SP1 HNF4A ENSG00000228452 GC01P042780 C1orf50 ENSG00000283580 GC01M042733
GH01J042777 Enhancer 0.6 Ensembl 600.7 -1.2 -1211 0.8 CC2D1A CTCF RAD21 ARID2 REST IRF2 RUNX3 SMC3 PRDM4 IRF4 ENSG00000228452 ZMYND12 GC01P042780 LOC105378683 C1orf50 ENSG00000283580 GC01M042733
GH01J043388 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 9.7 -612.9 -612911 3.4 ZNF652 SP1 ELF3 ZFX ZNF148 NKRF POLR2A MLLT1 CEBPG RERE MED8 SZT2 HYI CCDC24 CCDC30 HYI-AS1 PPIH ENSG00000228452 ENSG00000229431
GH01J042333 Promoter/Enhancer 1.6 EPDnew ENCODE 9.7 +441.3 441324 4.5 SP1 ZFX ELF3 MNT SIX5 ZNF148 NKRF POLR2A MLLT1 ZNF121 FOXJ3 GC01P042336 GC01P042337 CCDC30 P3H1 PPIH CLDN19 GUCA2B RNU6-536P ENSG00000236180
GH01J041911 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 5.4 +860.2 860244 9.4 ZNF652 SP1 NKRF ZNF687 ZSCAN21 ZBTB7A YY1 SP7 KLF14 PRDM1 HIVEP3 ENSG00000228452 CCDC30 FOXJ3 PIR53563
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228452 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228452 Gene

Genomic Locations for ENSG00000228452 Gene
chr1:42,775,813-42,776,790
(GRCh38/hg38)
Size:
978 bases
Orientation:
Minus strand
chr1:43,241,484-43,242,461
(GRCh37/hg19)
Size:
978 bases
Orientation:
Minus strand

Genomic View for ENSG00000228452 Gene

Genes around ENSG00000228452 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228452 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228452 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228452 Gene

Proteins for ENSG00000228452 Gene

Post-translational modifications for ENSG00000228452 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228452 Gene

Domains & Families for ENSG00000228452 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228452 Gene

Function for ENSG00000228452 Gene

Phenotypes From GWAS Catalog for ENSG00000228452 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228452 Gene

Localization for ENSG00000228452 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228452 Gene

Pathways & Interactions for ENSG00000228452 Gene

PathCards logo

SuperPathways for ENSG00000228452 Gene

No Data Available

Interacting Proteins for ENSG00000228452 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228452 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228452 Gene

Drugs & Compounds for ENSG00000228452 Gene

No Compound Related Data Available

Transcripts for ENSG00000228452 Gene

mRNA/cDNA for ENSG00000228452 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228452 Gene

No ASD Table

Relevant External Links for ENSG00000228452 Gene

GeneLoc Exon Structure for
ENSG00000228452

Expression for ENSG00000228452 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228452 Gene

genes like me logo Genes that share expression patterns with ENSG00000228452: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228452 Gene

Orthologs for ENSG00000228452 Gene

Evolution for ENSG00000228452 Gene

ENSEMBL:
Gene Tree for ENSG00000228452 (if available)
TreeFam:
Gene Tree for ENSG00000228452 (if available)

No data available for Orthologs for ENSG00000228452 Gene

Paralogs for ENSG00000228452 Gene

No data available for Paralogs for ENSG00000228452 Gene

Variants for ENSG00000228452 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228452 Gene

Disorders for ENSG00000228452 Gene

No disorders were found for ENSG00000228452 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228452 Gene

Publications for ENSG00000228452 Gene

No publications were found for ENSG00000228452 Gene.

No data available for External Links for ENSG00000228452 Gene

Products for ENSG00000228452 Gene

Sources for ENSG00000228452 Gene

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