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Aliases for ENSG00000228427 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000228427 Gene

  • AL590764.1 5

External Ids for ENSG00000228427 Gene

Previous GeneCards Identifiers for ENSG00000228427 Gene

  • GC0XM070403

Summaries for ENSG00000228427 Gene

GeneCards Summary for ENSG00000228427 Gene

ENSG00000228427 is an RNA Gene.

Additional gene information for ENSG00000228427 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228427 Gene

Genomics for ENSG00000228427 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228427 Gene

Promoters and enhancers for ENSG00000228427 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH0XJ071195 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE 650.7 +0.8 753 3.5 ELF1 ATF2 IRF4 POLR2A IKZF1 GABPB1 NBN HMBOX1 ZNF143 ATF7 ENSG00000228427 IL2RG CXCR3 MED12 TAF1 NLGN3
GH0XJ071300 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 12.7 -103.8 -103783 2 FOXA2 JUN YY1 FOSL1 POLR2A PATZ1 HNF4G PAF1 RXRA FOXA3 ITGB1BP2 ZMYM3 ENSG00000228427 TAF1 MED12 IL2RG LOC100131556 NONO
GH0XJ071181 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.3 15304 3.5 PKNOX1 FOXA2 ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 YY1 POLR2B TAF1 NONO OGT MED12 LOC100420758 ENSG00000229601 P2RY4 ARR3 RPS26P11 RTL5
GH0XJ071145 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 0.2 +52.0 52011 1.9 HDGF ATF1 FOXA2 ARNT ZNF493 TCF12 POLR2B GLIS2 E2F8 ZFP91 NLGN3 MED12 LOC392489 TAF1 NONO ZMYM3 LOC100420758 ARR3 P2RY4 OGT
GH0XJ071178 Enhancer 0.8 Ensembl ENCODE 0.4 +19.1 19074 0.6 CTCF ZNF654 RB1 ARNT TRIM22 REST KLF5 RAD21 ZNF148 CC2D1A ENSG00000228427 NLGN3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228427 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228427 Gene

Genomic Locations for ENSG00000228427 Gene
chrX:71,183,559-71,198,175
(GRCh38/hg38)
Size:
14,617 bases
Orientation:
Minus strand
chrX:70,403,409-70,418,025
(GRCh37/hg19)
Size:
14,617 bases
Orientation:
Minus strand

Genomic View for ENSG00000228427 Gene

Genes around ENSG00000228427 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228427 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228427 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228427 Gene

Proteins for ENSG00000228427 Gene

Post-translational modifications for ENSG00000228427 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228427 Gene

Domains & Families for ENSG00000228427 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228427 Gene

Function for ENSG00000228427 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228427 Gene

Localization for ENSG00000228427 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228427 Gene

Pathways & Interactions for ENSG00000228427 Gene

SuperPathways for ENSG00000228427 Gene

No Data Available

Interacting Proteins for ENSG00000228427 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228427 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228427 Gene

Drugs & Compounds for ENSG00000228427 Gene

No Compound Related Data Available

Transcripts for ENSG00000228427 Gene

mRNA/cDNA for ENSG00000228427 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228427 Gene

No ASD Table

Relevant External Links for ENSG00000228427 Gene

GeneLoc Exon Structure for
ENSG00000228427

Expression for ENSG00000228427 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228427 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228427 Gene

This gene is overexpressed in Whole Blood (x9.1) and Spleen (x8.5).
genes like me logo Genes that share expression patterns with ENSG00000228427: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228427 Gene

Orthologs for ENSG00000228427 Gene

Evolution for ENSG00000228427 Gene

ENSEMBL:
Gene Tree for ENSG00000228427 (if available)
TreeFam:
Gene Tree for ENSG00000228427 (if available)

No data available for Orthologs for ENSG00000228427 Gene

Paralogs for ENSG00000228427 Gene

No data available for Paralogs for ENSG00000228427 Gene

Variants for ENSG00000228427 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228427 Gene

Disorders for ENSG00000228427 Gene

No disorders were found for ENSG00000228427 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228427 Gene

Publications for ENSG00000228427 Gene

No publications were found for ENSG00000228427 Gene.

Products for ENSG00000228427 Gene

Sources for ENSG00000228427 Gene

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