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Aliases for ENSG00000228408 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000228408 Gene

  • AL031056.1 5

External Ids for ENSG00000228408 Gene

Previous GeneCards Identifiers for ENSG00000228408 Gene

  • GC06P149539

Summaries for ENSG00000228408 Gene

GeneCards Summary for ENSG00000228408 Gene

ENSG00000228408 is an RNA Gene.

Additional gene information for ENSG00000228408 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228408 Gene

Genomics for ENSG00000228408 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228408 Gene

Promoters and enhancers for ENSG00000228408 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J149216 Enhancer 0.2 FANTOM5 650.7 -1.4 -1364 0.2 ENSG00000228408 TAB2 TAB2-AS1 PIR33930
GH06J149127 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.9 -88.5 -88484 4.2 HNRNPUL1 PKNOX1 ATF1 ARNT IRF4 YY1 TCF12 GATA2 ZFP91 FOS TAB2 LATS1 PPIL4 KATNA1 NUP43 ENSG00000231760 ENSG00000228408 TAB2-AS1 GINM1 ZC3H12D
GH06J149248 Enhancer 1.3 FANTOM5 Ensembl dbSUPER 11.8 +32.0 31975 2.6 HDGF FOXA2 ZSCAN4 YBX1 ZNF48 EGR1 ZNF366 KLF7 ETV6 IKZF2 LATS1 NUP43 PPIL4 KATNA1 LOC100240714 RAET1E-AS1 ENSG00000233330 RPS18P9 ENSG00000228408 ENSG00000231760
GH06J149213 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.1 -4.7 -4741 1.4 PKNOX1 PAX8 MCM2 BATF IRF4 FOSL1 NFATC1 EED ETV6 IKZF2 TAB2-AS1 ENSG00000228408 ZC3H12D TAB2 SUMO4 PIR33930
GH06J149209 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10 -7.2 -7212 1.8 HDAC1 FOXA2 BATF CHAMP1 TCF12 FOS ETV6 RUNX3 NFIC KLF16 TAB2-AS1 ENSG00000228408 TAB2 ZC3H12D PIR33930
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228408 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228408 Gene

Genomic Locations for ENSG00000228408 Gene
chr6:149,217,926-149,245,554
(GRCh38/hg38)
Size:
27,629 bases
Orientation:
Plus strand
chr6:149,539,062-149,565,208
(GRCh37/hg19)
Size:
26,147 bases
Orientation:
Plus strand

Genomic View for ENSG00000228408 Gene

Genes around ENSG00000228408 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228408 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228408 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228408 Gene

Proteins for ENSG00000228408 Gene

Post-translational modifications for ENSG00000228408 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228408 Gene

Domains & Families for ENSG00000228408 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228408 Gene

Function for ENSG00000228408 Gene

Phenotypes From GWAS Catalog for ENSG00000228408 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228408 Gene

Localization for ENSG00000228408 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228408 Gene

Pathways & Interactions for ENSG00000228408 Gene

SuperPathways for ENSG00000228408 Gene

No Data Available

Interacting Proteins for ENSG00000228408 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228408 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228408 Gene

Drugs & Compounds for ENSG00000228408 Gene

No Compound Related Data Available

Transcripts for ENSG00000228408 Gene

mRNA/cDNA for ENSG00000228408 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(4) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228408 Gene

No ASD Table

Relevant External Links for ENSG00000228408 Gene

GeneLoc Exon Structure for
ENSG00000228408

Expression for ENSG00000228408 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228408 Gene

Orthologs for ENSG00000228408 Gene

Evolution for ENSG00000228408 Gene

ENSEMBL:
Gene Tree for ENSG00000228408 (if available)
TreeFam:
Gene Tree for ENSG00000228408 (if available)

No data available for Orthologs for ENSG00000228408 Gene

Paralogs for ENSG00000228408 Gene

No data available for Paralogs for ENSG00000228408 Gene

Variants for ENSG00000228408 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228408 Gene

Disorders for ENSG00000228408 Gene

No disorders were found for ENSG00000228408 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228408 Gene

Publications for ENSG00000228408 Gene

No publications were found for ENSG00000228408 Gene.

Products for ENSG00000228408 Gene

Sources for ENSG00000228408 Gene

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