Aliases for ENSG00000228401 Gene

Aliases for ENSG00000228401 Gene

  • Novel Transcript 5
  • HSALNG0075279 169
  • NONHSAG053800 94
  • NONHSAG053802 94
  • Lnc-AGPAT2-1 170
  • AL590226.1 5

External Ids for ENSG00000228401 Gene

Previous GeneCards Identifiers for ENSG00000228401 Gene

  • GC09M139543

Summaries for ENSG00000228401 Gene

GeneCards Summary for ENSG00000228401 Gene

ENSG00000228401 is an Uncategorized gene.

Rfam classification for ENSG00000228401 Gene

  • Metazoan signal recognition particle RNA

Additional gene information for ENSG00000228401 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000228401 Gene

Genomics for ENSG00000228401 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228401 Gene

Promoters and enhancers for ENSG00000228401 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J136653 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.6 -2.1 -2080 17.4 ZBTB40 CTCF SMARCE1 CC2D1A ELF1 L3MBTL2 TEAD4 ZNF148 GTF2F1 ZFX EGFL7 EHMT1 DPH7 SNHG7 ENTR1 ANAPC2 AGPAT2 SEC16A EXD3 MAN1B1
GH09J136648 Enhancer 0.7 ENCODE dbSUPER 0.4 +11.2 11209 1.7 SP1 ZNF24 RCOR1 NR2F2 NFIC ZNF335 POLR2A ATF2 RXRA LOC102724193 RF00017-8058 lnc-EGFL7-1 AGPAT2 EGFL7 ENSG00000228401 HSPC324
GH09J136652 Enhancer 0.6 ENCODE dbSUPER 0.4 +9.5 9477 0.2 ZNF687 NR2F1 NBN EBF1 ZBTB33 LOC102724193 RF00017-8058 lnc-EGFL7-1 EGFL7 ENSG00000228401 HSPC324
GH09J136650 Enhancer 0.6 ENCODE dbSUPER 0.4 +9.7 9657 0.2 ZNF687 NR2F1 NBN ZBTB33 LOC102724193 RF00017-8058 lnc-EGFL7-1 EGFL7 ENSG00000228401 HSPC324
GH09J136651 Enhancer 0.3 ENCODE dbSUPER 0.4 +10.3 10291 0.1 LOC102724193 RF00017-8058 lnc-EGFL7-1 EGFL7 ENSG00000228401 HSPC324
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228401 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228401 Gene

Genomic Locations for ENSG00000228401 Gene
chr9:136,648,610-136,660,421
(GRCh38/hg38)
Size:
11,812 bases
Orientation:
Minus strand

Genomic View for ENSG00000228401 Gene

Genes around ENSG00000228401 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228401 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228401 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228401 Gene

Proteins for ENSG00000228401 Gene

Post-translational modifications for ENSG00000228401 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228401 Gene

Domains & Families for ENSG00000228401 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000228401 Gene

Function for ENSG00000228401 Gene

Phenotypes From GWAS Catalog for ENSG00000228401 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228401 Gene

Localization for ENSG00000228401 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228401 Gene

Pathways & Interactions for ENSG00000228401 Gene

PathCards logo

SuperPathways for ENSG00000228401 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000228401 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228401 Gene

Drugs & Compounds for ENSG00000228401 Gene

No Compound Related Data Available

Transcripts for ENSG00000228401 Gene

mRNA/cDNA for ENSG00000228401 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(17) RNACentral transcripts :
(15) LNCipedia transcripts :
(5) NONCODE transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228401 Gene

No ASD Table

Relevant External Links for ENSG00000228401 Gene

GeneLoc Exon Structure for
ENSG00000228401

Expression for ENSG00000228401 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228401 Gene

Orthologs for ENSG00000228401 Gene

Evolution for ENSG00000228401 Gene

ENSEMBL:
Gene Tree for ENSG00000228401 (if available)
TreeFam:
Gene Tree for ENSG00000228401 (if available)

No data available for Orthologs for ENSG00000228401 Gene

Paralogs for ENSG00000228401 Gene

No data available for Paralogs for ENSG00000228401 Gene

Variants for ENSG00000228401 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228401 Gene

Disorders for ENSG00000228401 Gene

No disorders were found for ENSG00000228401 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228401 Gene

Publications for ENSG00000228401 Gene

No publications were found for ENSG00000228401 Gene.

No data available for External Links for ENSG00000228401 Gene

Products for ENSG00000228401 Gene

Sources for ENSG00000228401 Gene