Aliases for ENSG00000228327 Gene

Aliases for ENSG00000228327 Gene

  • General Transcription Factor IIi (GTF2I) Pseudogene 5
  • AL669831.1 5

External Ids for ENSG00000228327 Gene

Previous GeneCards Identifiers for ENSG00000228327 Gene

  • GC01M000700
  • GC01M000727
  • GC01M000749
  • GC01M000763
  • GC01M000932

Summaries for ENSG00000228327 Gene

GeneCards Summary for ENSG00000228327 Gene

ENSG00000228327 is a Pseudogene.

Additional gene information for ENSG00000228327 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000228327 Gene

Genomics for ENSG00000228327 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000228327 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J000777 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas 600.7 -0.7 -675 3.8 BRCA1 SP1 HNRNPL CREB1 GATAD2A ATF7 PRDM10 ZNF629 RFX1 SIX5 LINC01409 ENSG00000228327 LOC100288069 piR-60253-001 PERM1 ENSG00000285268 lnc-SAMD11-8 ENSG00000230021 OR4F16 SAMD11
GH01J001373 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas 29.5 -596.5 -596497 3.9 ZNF221 BRCA1 ARHGAP35 SP1 HNRNPL CREB1 GATAD2A PRDM10 REST ZNF629 AURKAIP1 MN308670 lnc-CCNL2-4 lnc-TAS1R3-3 CDK11A ENSG00000230092 ENSG00000269737 ATAD3B ENSG00000237094 LINC01786
GH01J000997 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 21.1 -221.3 -221315 5.3 ZNF221 RNF2 CEBPG SP1 HNRNPL CREB1 GATAD2A CTCF ATF7 PRDM10 ENSG00000272512 ISG15 HES4 INTS11 ATAD3B ENSG00000240731 WASH7P CCNL2 ENSG00000230092 CDK11A
GH01J001269 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 21.1 -494.1 -494051 5.8 SP1 CREB1 HNRNPL SIX5 NFKBIZ KDM1A ZNF692 POLR2A BACH1 LARP7 UBE2J2 LINC01786 lnc-C1QTNF12-1 ENSG00000230092 CDK11A ENSG00000269737 ATAD3B ENSG00000237094 CCNL2 INTS11
GH01J000826 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 12.1 -48.8 -48775 3.6 SP1 CREB1 PRDM10 ZNF629 LEF1 IKZF1 ZNF692 LARP7 DDX20 PRDM1 LINC00115 ENSG00000230021 LINC01409 ENSG00000237094 ENSG00000230092 CDK11A UBE2J2 ATAD3B LINC01128 WASH7P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228327 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000228327 Gene

Genomic Locations for ENSG00000228327 Gene
chr1:725,885-778,626
(GRCh38/hg38)
Size:
52,742 bases
Orientation:
Minus strand

Genomic View for ENSG00000228327 Gene

Genes around ENSG00000228327 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228327 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228327 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228327 Gene

Proteins for ENSG00000228327 Gene

Post-translational modifications for ENSG00000228327 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228327 Gene

Domains & Families for ENSG00000228327 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000228327 Gene

Function for ENSG00000228327 Gene

Phenotypes From GWAS Catalog for ENSG00000228327 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228327 Gene

Localization for ENSG00000228327 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228327 Gene

Pathways & Interactions for ENSG00000228327 Gene

PathCards logo

SuperPathways for ENSG00000228327 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000228327 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000228327 Gene

Drugs & Compounds for ENSG00000228327 Gene

No Compound Related Data Available

Transcripts for ENSG00000228327 Gene

mRNA/cDNA for ENSG00000228327 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228327 Gene

No ASD Table

Relevant External Links for ENSG00000228327 Gene

GeneLoc Exon Structure for
ENSG00000228327

Expression for ENSG00000228327 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228327 Gene

Orthologs for ENSG00000228327 Gene

Evolution for ENSG00000228327 Gene

ENSEMBL:
Gene Tree for ENSG00000228327 (if available)
TreeFam:
Gene Tree for ENSG00000228327 (if available)

No data available for Orthologs for ENSG00000228327 Gene

Paralogs for ENSG00000228327 Gene

No data available for Paralogs for ENSG00000228327 Gene

Variants for ENSG00000228327 Gene

Variation tolerance for ENSG00000228327 Gene

Gene Damage Index Score: 3.26; 52.77% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000228327 Gene

Disorders for ENSG00000228327 Gene

No disorders were found for ENSG00000228327 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228327 Gene

Publications for ENSG00000228327 Gene

No publications were found for ENSG00000228327 Gene.

No data available for Mastermind for ENSG00000228327 Gene

Products for ENSG00000228327 Gene

Sources for ENSG00000228327 Gene