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Aliases for ENSG00000228242 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000228242 Gene

  • AC093495.1 5

External Ids for ENSG00000228242 Gene

Previous GeneCards Identifiers for ENSG00000228242 Gene

  • GC03P014186

Summaries for ENSG00000228242 Gene

GeneCards Summary for ENSG00000228242 Gene

ENSG00000228242 is an RNA Gene.

Additional gene information for ENSG00000228242 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228242 Gene

Genomics for ENSG00000228242 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228242 Gene

Promoters and enhancers for ENSG00000228242 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J014140 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE dbSUPER 650.7 +0.1 124 8.5 ATF1 PKNOX1 FOXA2 SMAD1 ARID4B NEUROD1 SIN3A FEZF1 IRF4 YY1 TMEM43 ENSG00000228242 XPC VN1R20P LSM3 NR2C2 CHCHD4 RBSN ENSG00000268279
GH03J015097 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 50.3 +954.2 954198 2.4 CLOCK MLX ZFP64 DMAP1 YBX1 YY1 SLC30A9 ZNF213 E2F8 ZNF416 GC03M015152 RBSN NR2C2 CCDC174 SH3BP5-AS1 ENSG00000228242 CAPN7 XPC TMEM43 MRPS25
GH03J015063 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 26.6 +919.9 919896 2.9 HDGF PKNOX1 SMAD1 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 POLR2B MRPS25 PIRC12 SH3BP5-AS1 CCDC174 ENSG00000228242 NR2C2 XPC FGD5-AS1 GC03M015052 PIR50374
GH03J014222 Enhancer 1.4 Ensembl ENCODE dbSUPER 36.9 +85.1 85144 14 HDGF PKNOX1 CLOCK SMAD1 ARNT NEUROD1 SIN3A FEZF1 IRF4 ZNF766 CCDC174 XPC ENSG00000228242 NR2C2 CAPN7 SLC6A6 LINC01267 VN1R20P LOC105376958 ENSG00000255021
GH03J013412 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 18.8 -727.0 -726966 10 HDGF PKNOX1 CLOCK FOXA2 SMAD1 ARNT ARID4B SIN3A DMAP1 IRF4 NUP210 ENSG00000228242 XPC IQSEC1 GC03M014607
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228242 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228242 Gene

Genomic Locations for ENSG00000228242 Gene
chr3:14,144,637-14,165,978
(GRCh38/hg38)
Size:
21,342 bases
Orientation:
Plus strand
chr3:14,186,223-14,189,784
(GRCh37/hg19)
Size:
3,562 bases
Orientation:
Plus strand

Genomic View for ENSG00000228242 Gene

Genes around ENSG00000228242 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228242 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228242 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228242 Gene

Proteins for ENSG00000228242 Gene

Post-translational modifications for ENSG00000228242 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228242 Gene

Domains & Families for ENSG00000228242 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228242 Gene

Function for ENSG00000228242 Gene

Phenotypes From GWAS Catalog for ENSG00000228242 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228242 Gene

Localization for ENSG00000228242 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228242 Gene

Pathways & Interactions for ENSG00000228242 Gene

SuperPathways for ENSG00000228242 Gene

No Data Available

Interacting Proteins for ENSG00000228242 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228242 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228242 Gene

Drugs & Compounds for ENSG00000228242 Gene

No Compound Related Data Available

Transcripts for ENSG00000228242 Gene

mRNA/cDNA for ENSG00000228242 Gene

(17) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(17) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228242 Gene

No ASD Table

Relevant External Links for ENSG00000228242 Gene

GeneLoc Exon Structure for
ENSG00000228242

Expression for ENSG00000228242 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228242 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228242 Gene

This gene is overexpressed in Whole Blood (x8.7).
genes like me logo Genes that share expression patterns with ENSG00000228242: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228242 Gene

Orthologs for ENSG00000228242 Gene

Evolution for ENSG00000228242 Gene

ENSEMBL:
Gene Tree for ENSG00000228242 (if available)
TreeFam:
Gene Tree for ENSG00000228242 (if available)

No data available for Orthologs for ENSG00000228242 Gene

Paralogs for ENSG00000228242 Gene

No data available for Paralogs for ENSG00000228242 Gene

Variants for ENSG00000228242 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228242 Gene

Disorders for ENSG00000228242 Gene

No disorders were found for ENSG00000228242 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228242 Gene

Publications for ENSG00000228242 Gene

No publications were found for ENSG00000228242 Gene.

Products for ENSG00000228242 Gene

Sources for ENSG00000228242 Gene

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