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Aliases for ENSG00000228170 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000228170 Gene

  • AL031963.1 5

External Ids for ENSG00000228170 Gene

Previous GeneCards Identifiers for ENSG00000228170 Gene

  • GC06M003139
  • GC06M003140

Summaries for ENSG00000228170 Gene

GeneCards Summary for ENSG00000228170 Gene

ENSG00000228170 is an RNA Gene.

Additional gene information for ENSG00000228170 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228170 Gene

Genomics for ENSG00000228170 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228170 Gene

Promoters and enhancers for ENSG00000228170 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J003151 Enhancer 0.4 ENCODE 650.7 +1.1 1071 1.2 SCRT2 PRDM10 ENSG00000228170 GC06P003150 TUBB2B BPHL GC06M003095
GH06J002979 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 21 +166.9 166942 13.6 CLOCK FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF548 ZNF263 NQO2 LINC01011 RIPK1 PSMG4 ENSG00000228170 WRNIP1 ENSG00000272320 LOC105374888 SERPINB9 SERPINB6
GH06J004017 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 24.9 -867.5 -867464 7 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF416 ZNF143 ZNF548 PRPF4B ENSG00000230648 ENSG00000272248 RIPK1 PSMG4 ENSG00000228170 C6orf201 ENSG00000272320 LOC102724096 ENSG00000238158
GH06J003246 Promoter/Enhancer 2 VISTA EPDnew FANTOM5 Ensembl ENCODE 11.3 -95.1 -95092 3.1 HDAC1 FOXA2 MLX NFRKB DMAP1 ZBTB40 ZNF48 ZSCAN9 ETS1 ZNF335 TUBB2B TUBB2A ENSG00000228170 BPHL SLC22A23 PIR45758 PSMG4
GH06J003454 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 10 -303.2 -303179 3.5 FOXA2 ARID4B SIN3A DMAP1 ZNF2 ZNF143 KLF13 ZNF263 SP3 SP5 SLC22A23 PRPF4B ENSG00000228170 GC06M003429
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228170 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228170 Gene

Genomic Locations for ENSG00000228170 Gene
chr6:3,138,394-3,153,062
(GRCh38/hg38)
Size:
14,669 bases
Orientation:
Minus strand
chr6:3,138,628-3,153,296
(GRCh37/hg19)
Size:
14,669 bases
Orientation:
Minus strand

Genomic View for ENSG00000228170 Gene

Genes around ENSG00000228170 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228170 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228170 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228170 Gene

Proteins for ENSG00000228170 Gene

Post-translational modifications for ENSG00000228170 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228170 Gene

Domains & Families for ENSG00000228170 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228170 Gene

Function for ENSG00000228170 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228170 Gene

Localization for ENSG00000228170 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228170 Gene

Pathways & Interactions for ENSG00000228170 Gene

SuperPathways for ENSG00000228170 Gene

No Data Available

Interacting Proteins for ENSG00000228170 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228170 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228170 Gene

Drugs & Compounds for ENSG00000228170 Gene

No Compound Related Data Available

Transcripts for ENSG00000228170 Gene

mRNA/cDNA for ENSG00000228170 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228170 Gene

No ASD Table

Relevant External Links for ENSG00000228170 Gene

GeneLoc Exon Structure for
ENSG00000228170

Expression for ENSG00000228170 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228170 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228170 Gene

This gene is overexpressed in Liver (x6.2) and Kidney - Cortex (x4.6).
genes like me logo Genes that share expression patterns with ENSG00000228170: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228170 Gene

Orthologs for ENSG00000228170 Gene

Evolution for ENSG00000228170 Gene

ENSEMBL:
Gene Tree for ENSG00000228170 (if available)
TreeFam:
Gene Tree for ENSG00000228170 (if available)

No data available for Orthologs for ENSG00000228170 Gene

Paralogs for ENSG00000228170 Gene

No data available for Paralogs for ENSG00000228170 Gene

Variants for ENSG00000228170 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228170 Gene

Disorders for ENSG00000228170 Gene

No disorders were found for ENSG00000228170 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228170 Gene

Publications for ENSG00000228170 Gene

No publications were found for ENSG00000228170 Gene.

Products for ENSG00000228170 Gene

Sources for ENSG00000228170 Gene

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