Aliases for ENSG00000228113 Gene

Subcategory (RNA class) for ENSG00000228113 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000228113 Gene

  • Novel Transcript, Antisense To STEAP4 5
  • HSALNG0059407 169
  • NONHSAG048146 94
  • Lnc-ADAM22-2 170
  • AC003991.1 5

External Ids for ENSG00000228113 Gene

Previous GeneCards Identifiers for ENSG00000228113 Gene

  • GC07P087861

Summaries for ENSG00000228113 Gene

GeneCards Summary for ENSG00000228113 Gene

ENSG00000228113 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000228113 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000228113 Gene

Genomics for ENSG00000228113 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228113 Gene

Promoters and enhancers for ENSG00000228113 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J088217 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 760.3 +0.2 193 4.1 ZNF24 SP1 ZBTB40 CTCF SREBF1 SIX5 POLR2A MYC ETV6 ELF1 SRI ENSG00000228113 lnc-ADAM22-7 DBF4 ENSG00000254003 LOC102723885 lnc-STEAP4-2
GH07J088224 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 10.1 +6.6 6583 4.3 GATA3 FOXA1 TCF7L2 NR2F1 NR2F6 ZNF217 CREB1 MIXL1 HLF MNT SRI lnc-STEAP4-2 ENSG00000228113 LOC102723885 lnc-ADAM22-7
GH07J088309 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 6.9 +97.5 97544 15 USF2 SP1 IKZF1 RXRA IKZF2 CEBPB PKNOX1 MNT EP300 ELF1 STEAP4 TEX47 ENSG00000228113 SRI TP53TG1 piR-61240-267
GH07J088228 Enhancer 0.4 ENCODE 11.8 +10.2 10183 2.1 TRIM24 TRIM28 ATF2 lnc-SRI-1 SRI ENSG00000228113 LOC102723885
GH07J088331 Enhancer 0.6 Ensembl ENCODE 7 +109.9 109942 5 ZNF680 RXRA SP1 RUNX3 NR2F2 STEAP4 ENSG00000228113 piR-61240-267
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228113 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228113 Gene

Genomic Locations for ENSG00000228113 Gene
chr7:88,219,359-88,304,367
(GRCh38/hg38)
Size:
85,009 bases
Orientation:
Plus strand
chr7:87,848,674-87,921,781
(GRCh37/hg19)
Size:
73,108 bases
Orientation:
Plus strand

Genomic View for ENSG00000228113 Gene

Genes around ENSG00000228113 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228113 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228113 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228113 Gene

Proteins for ENSG00000228113 Gene

Post-translational modifications for ENSG00000228113 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228113 Gene

Domains & Families for ENSG00000228113 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000228113 Gene

Function for ENSG00000228113 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228113 Gene

Localization for ENSG00000228113 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228113 Gene

Pathways & Interactions for ENSG00000228113 Gene

PathCards logo

SuperPathways for ENSG00000228113 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000228113 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228113 Gene

Drugs & Compounds for ENSG00000228113 Gene

No Compound Related Data Available

Transcripts for ENSG00000228113 Gene

mRNA/cDNA for ENSG00000228113 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228113 Gene

No ASD Table

Relevant External Links for ENSG00000228113 Gene

GeneLoc Exon Structure for
ENSG00000228113

Expression for ENSG00000228113 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228113 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228113 Gene

This gene is overexpressed in Adipose - Subcutaneous (x4.5).
genes like me logo Genes that share expression patterns with ENSG00000228113: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228113 Gene

Orthologs for ENSG00000228113 Gene

Evolution for ENSG00000228113 Gene

ENSEMBL:
Gene Tree for ENSG00000228113 (if available)
TreeFam:
Gene Tree for ENSG00000228113 (if available)

No data available for Orthologs for ENSG00000228113 Gene

Paralogs for ENSG00000228113 Gene

No data available for Paralogs for ENSG00000228113 Gene

Variants for ENSG00000228113 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228113 Gene

Disorders for ENSG00000228113 Gene

No disorders were found for ENSG00000228113 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228113 Gene

Publications for ENSG00000228113 Gene

No publications were found for ENSG00000228113 Gene.

No data available for External Links for ENSG00000228113 Gene

Products for ENSG00000228113 Gene

Sources for ENSG00000228113 Gene