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Aliases for ENSG00000228079 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000228079 Gene

  • AC012368.2 5

External Ids for ENSG00000228079 Gene

Previous GeneCards Identifiers for ENSG00000228079 Gene

  • GC02M064313

Summaries for ENSG00000228079 Gene

GeneCards Summary for ENSG00000228079 Gene

ENSG00000228079 is an RNA Gene. Diseases associated with ENSG00000228079 include Thyroid Cancer, Nonmedullary, 1.

Additional gene information for ENSG00000228079 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228079 Gene

Genomics for ENSG00000228079 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228079 Gene

Promoters and enhancers for ENSG00000228079 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J064091 Enhancer 0.7 ENCODE 0.7 -3.8 -3776 1.5 BACH1 STAT5A EBF1 BATF RELA NFATC1 ATF7 BCLAF1 IKZF2 RUNX3 MDH1 ENSG00000228079 GC02M063958 PELI1
GH02J064104 Enhancer 1.1 ENCODE dbSUPER 0.4 -17.6 -17570 3.5 ELF3 ARID4B RAD21 RARA ZNF366 SCRT2 FOS CREM IKZF2 THAP11 LOC100507006 ENSG00000228079 GC02M063958 PELI1
GH02J064090 Promoter 0.6 EPDnew 0.7 -2.2 -2212 0.1 POLR2A VPS54 ENSG00000228079 GC02M063958
GH02J064100 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -13.6 -13577 1.9 PKNOX1 JUN JUNB EBF1 MEF2B BATF ATF2 JUND EED IKZF1 MDH1 ENSG00000228079 GC02M063958 PELI1
GH02J064017 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.2 +69.1 69124 3.4 HDGF PKNOX1 SMAD1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZNF2 VPS54 WDPCP SERTAD2 ENSG00000228079 GC02M063958
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228079 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228079 Gene

Genomic Locations for ENSG00000228079 Gene
chr2:64,086,353-64,088,246
(GRCh38/hg38)
Size:
1,894 bases
Orientation:
Minus strand
chr2:64,313,484-64,315,380
(GRCh37/hg19)
Size:
1,897 bases
Orientation:
Minus strand

Genomic View for ENSG00000228079 Gene

Genes around ENSG00000228079 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228079 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228079 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228079 Gene

Proteins for ENSG00000228079 Gene

Post-translational modifications for ENSG00000228079 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228079 Gene

Domains & Families for ENSG00000228079 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228079 Gene

Function for ENSG00000228079 Gene

Phenotypes From GWAS Catalog for ENSG00000228079 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228079 Gene

Localization for ENSG00000228079 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228079 Gene

Pathways & Interactions for ENSG00000228079 Gene

SuperPathways for ENSG00000228079 Gene

No Data Available

Interacting Proteins for ENSG00000228079 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228079 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228079 Gene

Drugs & Compounds for ENSG00000228079 Gene

No Compound Related Data Available

Transcripts for ENSG00000228079 Gene

mRNA/cDNA for ENSG00000228079 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228079 Gene

No ASD Table

Relevant External Links for ENSG00000228079 Gene

GeneLoc Exon Structure for
ENSG00000228079

Expression for ENSG00000228079 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228079 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228079 Gene

This gene is overexpressed in Whole Blood (x8.7).
genes like me logo Genes that share expression patterns with ENSG00000228079: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228079 Gene

Orthologs for ENSG00000228079 Gene

Evolution for ENSG00000228079 Gene

ENSEMBL:
Gene Tree for ENSG00000228079 (if available)
TreeFam:
Gene Tree for ENSG00000228079 (if available)

No data available for Orthologs for ENSG00000228079 Gene

Paralogs for ENSG00000228079 Gene

No data available for Paralogs for ENSG00000228079 Gene

Variants for ENSG00000228079 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228079 Gene

Disorders for ENSG00000228079 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ENSG00000228079 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
thyroid cancer, nonmedullary, 1
  • nmtc1
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ENSG00000228079: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228079 Gene

Publications for ENSG00000228079 Gene

No publications were found for ENSG00000228079 Gene.

Products for ENSG00000228079 Gene

Sources for ENSG00000228079 Gene

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