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Aliases for ENSG00000228053 Gene

Subcategory (RNA class) for ENSG00000228053 Gene

antisense

Aliases for ENSG00000228053 Gene

  • Ribosomal Protein L21 (RPL21) Pseudogene 5
  • AL158823.1 5

External Ids for ENSG00000228053 Gene

ORGUL Members for ENSG00000228053 Gene

Previous GeneCards Identifiers for ENSG00000228053 Gene

  • GC09M112788

Summaries for ENSG00000228053 Gene

GeneCards Summary for ENSG00000228053 Gene

ENSG00000228053 is a Pseudogene, and is affiliated with the antisense RNA class.

Additional gene information for ENSG00000228053 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000228053 Gene

Genomics for ENSG00000228053 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228053 Gene

Promoters and enhancers for ENSG00000228053 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J110015 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE dbSUPER 0.4 +9.2 9200 2.1 ZNF384 SP1 POLR2A TCF7L2 TCF7 NFE2 JUND FOS HNF4A JUN AKAP2 ENSG00000228053 PALM2-AKAP2
GH09J110021 Enhancer 0.6 dbSUPER 0.7 +3.5 3547 1.8 IKZF1 IKZF2 DPF2 EED RUNX3 BCLAF1 ELF1 BATF EBF1 POLR2A ENSG00000228053 PALM2-AKAP2
GH09J110006 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 +17.3 17254 2.4 IKZF1 IKZF2 EED RUNX3 USF1 GATA3 CTCF EBF1 ATF2 RAD21 ENSG00000228053 PALM2-AKAP2
GH09J109965 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.2 +56.9 56877 5.7 SP1 ZNF687 CTCF JUND RELA CREM MLLT1 RAD21 ZBED1 IKZF1 AKAP2 PALM2-AKAP2 PALM2 ENSG00000228053
GH09J109985 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.3 +37.8 37757 4.8 POLR2A YBX1 CREB1 JUND JUN ENSG00000228053 PALM2-AKAP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228053 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228053 Gene

Genomic Locations for ENSG00000228053 Gene
chr9:110,024,881-110,025,358
(GRCh38/hg38)
Size:
478 bases
Orientation:
Minus strand

Genomic View for ENSG00000228053 Gene

Genes around ENSG00000228053 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228053 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228053 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228053 Gene

Proteins for ENSG00000228053 Gene

Post-translational modifications for ENSG00000228053 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228053 Gene

Domains & Families for ENSG00000228053 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000228053 Gene

Function for ENSG00000228053 Gene

Phenotypes From GWAS Catalog for ENSG00000228053 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228053 Gene

Localization for ENSG00000228053 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228053 Gene

Pathways & Interactions for ENSG00000228053 Gene

PathCards logo

SuperPathways for ENSG00000228053 Gene

No Data Available

Interacting Proteins for ENSG00000228053 Gene

Gene Ontology (GO) - Biological Process for ENSG00000228053 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228053 Gene

Drugs & Compounds for ENSG00000228053 Gene

No Compound Related Data Available

Transcripts for ENSG00000228053 Gene

mRNA/cDNA for ENSG00000228053 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228053 Gene

No ASD Table

Relevant External Links for ENSG00000228053 Gene

GeneLoc Exon Structure for
ENSG00000228053

Expression for ENSG00000228053 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228053 Gene

Orthologs for ENSG00000228053 Gene

Evolution for ENSG00000228053 Gene

ENSEMBL:
Gene Tree for ENSG00000228053 (if available)
TreeFam:
Gene Tree for ENSG00000228053 (if available)

No data available for Orthologs for ENSG00000228053 Gene

Paralogs for ENSG00000228053 Gene

No data available for Paralogs for ENSG00000228053 Gene

Variants for ENSG00000228053 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228053 Gene

Disorders for ENSG00000228053 Gene

No disorders were found for ENSG00000228053 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228053 Gene

Publications for ENSG00000228053 Gene

No publications were found for ENSG00000228053 Gene.

No data available for External Links for ENSG00000228053 Gene

Products for ENSG00000228053 Gene

Sources for ENSG00000228053 Gene

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