Aliases for ENSG00000228043 Gene

Subcategory (RNA class) for ENSG00000228043 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000228043 Gene

  • Novel Transcript 5
  • NONHSAG029401.2 91
  • HSALNG0019154 164
  • Lnc-NXPH2-3 165
  • AC114763.1 5

External Ids for ENSG00000228043 Gene

Previous GeneCards Identifiers for ENSG00000228043 Gene

  • GC02M139175
  • GC02M138418

Summaries for ENSG00000228043 Gene

GeneCards Summary for ENSG00000228043 Gene

ENSG00000228043 is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ENSG00000228043 include Melanoma, Cutaneous Malignant 1.

Rfam classification for ENSG00000228043 Gene

  • Metazoan signal recognition particle RNA

Additional gene information for ENSG00000228043 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000228043 Gene

Genomics for ENSG00000228043 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000228043 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228043 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000228043 Gene

Genomic Locations for ENSG00000228043 Gene
chr2:138,277,522-138,501,698
(GRCh38/hg38)
Size:
224,177 bases
Orientation:
Minus strand
chr2:139,175,854-139,259,268
(GRCh37/hg19)
Size:
83,415 bases
Orientation:
Minus strand

Genomic View for ENSG00000228043 Gene

Genes around ENSG00000228043 on UCSC Golden Path with GeneCards custom track
ENSG00000228043 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000228043 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228043 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228043 Gene

Proteins for ENSG00000228043 Gene

Post-translational modifications for ENSG00000228043 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228043 Gene

Domains & Families for ENSG00000228043 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000228043 Gene

Function for ENSG00000228043 Gene

Phenotypes From GWAS Catalog for ENSG00000228043 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228043 Gene

Localization for ENSG00000228043 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228043 Gene

Pathways & Interactions for ENSG00000228043 Gene

PathCards logo

SuperPathways for ENSG00000228043 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000228043 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000228043 Gene

Drugs & Compounds for ENSG00000228043 Gene

No Compound Related Data Available

Transcripts for ENSG00000228043 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000228043 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000D9E82_9606 lncRNA 928 4

Ensembl: ENST00000431985 (view in UCSC) ,

LncBook: HSALNT0040453,

LNCipedia: lnc-NXPH2-3:1,

NONCODE: NONHSAT074664.2,

URS0000336AC3_9606 lncRNA 867 3

Ensembl: ENST00000414911 (view in UCSC) ,

LNCipedia: lnc-NXPH2-3:2,

NONCODE: NONHSAT074666.2,

URS00008B721E_9606 lncRNA 1543 3

LncBook: HSALNT0040454,

LNCipedia: lnc-NXPH2-3:4,

NONCODE: NONHSAT074665.2,

URS00008B8C5D_9606 lncRNA 2498 2

LNCipedia: lnc-NXPH2-3:3,

NONCODE: NONHSAT074671.2,

URS0000D5A2F9_9606 lncRNA 888 2

LncBook: HSALNT0040455,

LNCipedia: lnc-NXPH2-3:8,

ENSG00000228043 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228043 Gene

No ASD Table

Relevant External Links for ENSG00000228043 Gene

GeneLoc Exon Structure for
ENSG00000228043

No data available for mRNA/cDNA for ENSG00000228043 Gene

Expression for ENSG00000228043 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000228043 Gene

genes like me logo Genes that share expression patterns with ENSG00000228043: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228043 Gene

Orthologs for ENSG00000228043 Gene

Evolution for ENSG00000228043 Gene

ENSEMBL:
Gene Tree for ENSG00000228043 (if available)
TreeFam:
Gene Tree for ENSG00000228043 (if available)

No data available for Orthologs for ENSG00000228043 Gene

Paralogs for ENSG00000228043 Gene

No data available for Paralogs for ENSG00000228043 Gene

Variants for ENSG00000228043 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228043 Gene

Disorders for ENSG00000228043 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ENSG00000228043 Gene - From: DISEASES

Disorder Aliases PubMed IDs
melanoma, cutaneous malignant 1
  • melanoma, cutaneous malignant, susceptibility to, 1
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ENSG00000228043: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228043 Gene

Publications for ENSG00000228043 Gene

No publications were found for ENSG00000228043 Gene.

No data available for Mastermind for ENSG00000228043 Gene

Products for ENSG00000228043 Gene

Sources for ENSG00000228043 Gene