Aliases for ENSG00000228033 Gene

Subcategory (RNA class) for ENSG00000228033 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000228033 Gene

  • Novel Transcript 5
  • NONHSAG027751 94
  • HSALNG0014896 169
  • AC010967.1 5
  • Lnc-ASB3-1 170

External Ids for ENSG00000228033 Gene

Previous GeneCards Identifiers for ENSG00000228033 Gene

  • GC02M052949

Summaries for ENSG00000228033 Gene

GeneCards Summary for ENSG00000228033 Gene

ENSG00000228033 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000228033 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000228033 Gene

Genomics for ENSG00000228033 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000228033 Gene

Promoters and enhancers for ENSG00000228033 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J053311 Enhancer 0.7 Ensembl ENCODE 6.7 -352.0 -351977 4.6 POLR2A CREB1 MAZ YBX1 EP300 RAD21 STAT3 ZZZ3 ZNF366 NFE2L2 PSME4 ENSG00000228033 piR-56451-058 piR-31937-102
GH02J052932 Enhancer 0.8 ENCODE 0.3 +26.9 26931 3.4 ZNF24 JUND RAD21 SP1 CREM ZBED1 IKZF1 BACH1 SMARCC1 TRIM22 RF00994-484 ENSG00000228033 LOC105369165 piR-43103-029
GH02J052918 Enhancer 0.5 ENCODE 0.3 +42.6 42621 1.1 CEBPB EP300 PRDM1 FOS STAT3 RF00994-484 piR-43103-029 LOC105369165 ENSG00000228033
GH02J052881 Enhancer 0.6 Ensembl 0.2 +79.6 79551 1 FOSL2 CREB1 CTBP1 MNT SP1 FOS DPF2 ZNF217 FOXA1 JUND ENSG00000232668 lnc-CHAC2-6 ENSG00000232604 ENSG00000228033 LOC105369165
GH02J052904 Enhancer 0.4 Ensembl 0.2 +56.7 56651 0.4 CTBP1 ZNF217 HNF4A piR-43103-029 RF00994-484 ENSG00000228033 LOC105369165
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000228033 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000228033 Gene

Genomic Locations for ENSG00000228033 Gene
chr2:52,722,671-52,961,452
(GRCh38/hg38)
Size:
238,782 bases
Orientation:
Minus strand
chr2:52,949,815-53,137,158
(GRCh37/hg19)
Size:
187,344 bases
Orientation:
Minus strand

Genomic View for ENSG00000228033 Gene

Genes around ENSG00000228033 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000228033 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000228033 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000228033 Gene

Proteins for ENSG00000228033 Gene

Post-translational modifications for ENSG00000228033 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000228033 Gene

Domains & Families for ENSG00000228033 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000228033 Gene

Function for ENSG00000228033 Gene

Phenotypes From GWAS Catalog for ENSG00000228033 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000228033 Gene

Localization for ENSG00000228033 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000228033 Gene

Pathways & Interactions for ENSG00000228033 Gene

PathCards logo

SuperPathways for ENSG00000228033 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000228033 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000228033 Gene

Drugs & Compounds for ENSG00000228033 Gene

No Compound Related Data Available

Transcripts for ENSG00000228033 Gene

mRNA/cDNA for ENSG00000228033 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(13) RNACentral transcripts :
(11) LNCipedia transcripts :
(7) LncBook transcripts :
(4) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000228033 Gene

No ASD Table

Relevant External Links for ENSG00000228033 Gene

GeneLoc Exon Structure for
ENSG00000228033

Expression for ENSG00000228033 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000228033 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000228033 Gene

This gene is overexpressed in Pancreas (x27.9) and Testis (x18.4).
genes like me logo Genes that share expression patterns with ENSG00000228033: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000228033 Gene

Orthologs for ENSG00000228033 Gene

Evolution for ENSG00000228033 Gene

ENSEMBL:
Gene Tree for ENSG00000228033 (if available)
TreeFam:
Gene Tree for ENSG00000228033 (if available)

No data available for Orthologs for ENSG00000228033 Gene

Paralogs for ENSG00000228033 Gene

No data available for Paralogs for ENSG00000228033 Gene

Variants for ENSG00000228033 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000228033 Gene

Disorders for ENSG00000228033 Gene

No disorders were found for ENSG00000228033 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000228033 Gene

Publications for ENSG00000228033 Gene

No publications were found for ENSG00000228033 Gene.

No data available for External Links for ENSG00000228033 Gene

Products for ENSG00000228033 Gene

Sources for ENSG00000228033 Gene