Aliases for ENSG00000227981 Gene

Subcategory (RNA class) for ENSG00000227981 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000227981 Gene

  • Novel Transcript 5
  • NONHSAG030457 94
  • HSALNG0022086 169
  • AC012668.1 5
  • Lnc-FN1-2 170

External Ids for ENSG00000227981 Gene

Previous GeneCards Identifiers for ENSG00000227981 Gene

  • GC02P216444
  • GC02M216444

Summaries for ENSG00000227981 Gene

GeneCards Summary for ENSG00000227981 Gene

ENSG00000227981 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000227981 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000227981 Gene

Genomics for ENSG00000227981 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227981 Gene

Promoters and enhancers for ENSG00000227981 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J215583 Enhancer 0.2 Ensembl 750.6 -1.6 -1566 0.8 ENSG00000227981 ATIC LOC102724861 ENSG00000237525
GH02J215579 Enhancer 0.7 Ensembl ENCODE 0.6 +2.7 2681 2.3 POLR2A CEBPA CEBPB SP1 EP300 JUND HOMEZ lnc-ATIC-6 ATIC ENSG00000227981 ENSG00000237525
GH02J215609 Enhancer 1 FANTOM5 Ensembl ENCODE 0.3 -26.9 -26906 1.2 HLF CEBPG ZNF644 POLR2A CEBPA GATAD2A ATF7 FOS NFIL3 HNF4A LINC00607 LOC102724861 ENSG00000227981 ENSG00000237525
GH02J215597 Enhancer 0.8 Ensembl ENCODE 0.4 -15.9 -15866 2.2 SMARCE1 CC2D1A TEAD4 SMARCA4 EGR1 PKNOX1 ZNF766 FOXK2 FOS NR2C2 ENSG00000227981 LOC102724861 ENSG00000237525
GH02J215611 Enhancer 1 Ensembl ENCODE 0.3 -30.1 -30065 3.8 ZNF24 NR2F1 NR2F6 RELA ZNF652 MLLT1 KAT8 ZNF644 ZBTB33 IKZF1 LINC00607 LOC102724861 ENSG00000227981 ENSG00000237525
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227981 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227981 Gene

Genomic Locations for ENSG00000227981 Gene
chr2:215,579,407-215,582,635
(GRCh38/hg38)
Size:
3,229 bases
Orientation:
Minus strand
chr2:216,444,130-216,447,358
(GRCh37/hg19)
Size:
3,229 bases
Orientation:
Minus strand

Genomic View for ENSG00000227981 Gene

Genes around ENSG00000227981 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227981 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227981 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227981 Gene

Proteins for ENSG00000227981 Gene

Post-translational modifications for ENSG00000227981 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227981 Gene

Domains & Families for ENSG00000227981 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000227981 Gene

Function for ENSG00000227981 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227981 Gene

Localization for ENSG00000227981 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227981 Gene

Pathways & Interactions for ENSG00000227981 Gene

PathCards logo

SuperPathways for ENSG00000227981 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000227981 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227981 Gene

Drugs & Compounds for ENSG00000227981 Gene

No Compound Related Data Available

Transcripts for ENSG00000227981 Gene

mRNA/cDNA for ENSG00000227981 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LncBook transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227981 Gene

No ASD Table

Relevant External Links for ENSG00000227981 Gene

GeneLoc Exon Structure for
ENSG00000227981

Expression for ENSG00000227981 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227981 Gene

genes like me logo Genes that share expression patterns with ENSG00000227981: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227981 Gene

Orthologs for ENSG00000227981 Gene

Evolution for ENSG00000227981 Gene

ENSEMBL:
Gene Tree for ENSG00000227981 (if available)
TreeFam:
Gene Tree for ENSG00000227981 (if available)

No data available for Orthologs for ENSG00000227981 Gene

Paralogs for ENSG00000227981 Gene

No data available for Paralogs for ENSG00000227981 Gene

Variants for ENSG00000227981 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227981 Gene

Disorders for ENSG00000227981 Gene

No disorders were found for ENSG00000227981 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227981 Gene

Publications for ENSG00000227981 Gene

No publications were found for ENSG00000227981 Gene.

No data available for External Links for ENSG00000227981 Gene

Products for ENSG00000227981 Gene

Sources for ENSG00000227981 Gene