Aliases for ENSG00000227885 Gene

Subcategory (RNA class) for ENSG00000227885 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000227885 Gene

  • Novel Transcript 5
  • HSALNG0050699 167
  • Lnc-KLHL31-11 168
  • NONHSAG043967 92
  • Lnc-KLHL31-2 168
  • AL590652.1 5

External Ids for ENSG00000227885 Gene

Previous GeneCards Identifiers for ENSG00000227885 Gene

  • GC06M053605

Summaries for ENSG00000227885 Gene

GeneCards Summary for ENSG00000227885 Gene

ENSG00000227885 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000227885 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000227885 Gene

Genomics for ENSG00000227885 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227885 Gene

Promoters and enhancers for ENSG00000227885 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J053791 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 505.3 +0.0 36 5.8 ZBTB40 ZNF217 EP300 CTCF NRF1 POLR2G SP1 NCOR1 PHF8 ZFX LRRC1 KLHL31 ENSG00000227885 MLIP-IT1
GH06J053743 Enhancer 0.8 Ensembl ENCODE 9 +50.3 50287 1.3 ZNF217 CUX1 GATAD2B CTBP1 HCFC1 NEUROD1 ELF1 GATA3 PAX8 DPF2 LRRC1 ENSG00000227885 lnc-LRRC1-6 piR-48222-307
GH06J053718 Enhancer 0.9 Ensembl ENCODE 7.3 +75.8 75754 1.3 CTCF EP300 RFX1 ZBTB25 RAD21 TRIM22 KMT2B DEK TCF12 SMC3 KLHL31 ENSG00000227885 lnc-KLHL31-5
GH06J053808 Enhancer 1.1 Ensembl ENCODE dbSUPER 5.9 -15.4 -15410 3.8 ZIC2 CLOCK OSR2 SIN3A ZNF316 MAFF FOS SAP130 MAFK MEF2B ENSG00000236740 MLIP LRRC1 ENSG00000227885 piR-51007-004
GH06J053751 Enhancer 0.7 Ensembl ENCODE 8.9 +42.0 41973 2.1 EP300 FOS CEBPB JUN JUND STAT3 GATA2 GATA3 CEBPG MYC MLIP-IT1 ENSG00000227885 KLHL31 LRRC1 lnc-LRRC1-6 piR-48222-307
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227885 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227885 Gene

Genomic Locations for ENSG00000227885 Gene
chr6:53,739,266-53,794,904
(GRCh38/hg38)
Size:
55,639 bases
Orientation:
Minus strand
chr6:53,605,547-53,611,820
(GRCh37/hg19)
Size:
6,274 bases
Orientation:
Minus strand

Genomic View for ENSG00000227885 Gene

Genes around ENSG00000227885 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227885 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227885 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227885 Gene

Proteins for ENSG00000227885 Gene

Post-translational modifications for ENSG00000227885 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227885 Gene

Domains & Families for ENSG00000227885 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000227885 Gene

Function for ENSG00000227885 Gene

Phenotypes From GWAS Catalog for ENSG00000227885 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227885 Gene

Localization for ENSG00000227885 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227885 Gene

Pathways & Interactions for ENSG00000227885 Gene

PathCards logo

SuperPathways for ENSG00000227885 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000227885 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000227885 Gene

Drugs & Compounds for ENSG00000227885 Gene

No Compound Related Data Available

Transcripts for ENSG00000227885 Gene

mRNA/cDNA for ENSG00000227885 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227885 Gene

No ASD Table

Relevant External Links for ENSG00000227885 Gene

GeneLoc Exon Structure for
ENSG00000227885

Expression for ENSG00000227885 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000227885 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000227885 Gene

This gene is overexpressed in Thyroid (x4.6).
genes like me logo Genes that share expression patterns with ENSG00000227885: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227885 Gene

Orthologs for ENSG00000227885 Gene

Evolution for ENSG00000227885 Gene

ENSEMBL:
Gene Tree for ENSG00000227885 (if available)
TreeFam:
Gene Tree for ENSG00000227885 (if available)

No data available for Orthologs for ENSG00000227885 Gene

Paralogs for ENSG00000227885 Gene

No data available for Paralogs for ENSG00000227885 Gene

Variants for ENSG00000227885 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227885 Gene

Disorders for ENSG00000227885 Gene

No disorders were found for ENSG00000227885 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227885 Gene

Publications for ENSG00000227885 Gene

No publications were found for ENSG00000227885 Gene.

No data available for Mastermind for ENSG00000227885 Gene

Products for ENSG00000227885 Gene

Sources for ENSG00000227885 Gene