Aliases for ENSG00000227799 Gene

Aliases for ENSG00000227799 Gene

  • Pseudogene Similar To RIKEN CDNA 2210021J22 5
  • AC012358.3 5

External Ids for ENSG00000227799 Gene

Previous GeneCards Identifiers for ENSG00000227799 Gene

  • GC02P055451

Summaries for ENSG00000227799 Gene

GeneCards Summary for ENSG00000227799 Gene

ENSG00000227799 is a Pseudogene.

Additional gene information for ENSG00000227799 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000227799 Gene

Genomics for ENSG00000227799 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000227799 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J055222 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -0.2 -239 3 POLR2A BACH1 LARP7 ZNF143 ZIC2 PATZ1 NR2C1 TRIM22 GTF2F1 ZNF600 CDPF1P1 ENSG00000227799 lnc-RPS27A-2 CLHC1 EML6 RTN4 CCDC88A ENSG00000203327 RPS27A lnc-MTIF2-3
GH02J055225 Enhancer 0.3 ENCODE 600.7 +1.5 1480 0.2 USF1 CDPF1P1 ENSG00000227799 lnc-RPS27A-2 CLHC1 PRORSD1P RPS27A lnc-MTIF2-3 RTN4
GH02J055518 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 11.1 +295.4 295421 3 SP1 CREB1 PRDM10 ZNF629 TFE3 RFX1 IKZF1 RCOR2 POLR2A FOS CFAP36 lnc-PPP4R3B-4 piR-43105-352 CLHC1 ENSG00000227799 PNPT1 PPP4R3B RTN4 HE855957
GH02J055018 Promoter/Enhancer 1 Ensembl ENCODE dbSUPER 9.9 -205.0 -204995 1.1 ZBTB20 CEBPG SPI1 CEBPB PRDM10 ZNF169 ZNF652 DACH1 RTN4 ENSG00000227799 RF00026-544 RNU6-433P RF00017-3194 EML6
GH02J055021 Promoter/Enhancer 0.8 Ensembl dbSUPER 9.9 -204.2 -204179 0.2 FOSL2 CEBPB JUN ZNF169 JUND RTN4 ENSG00000227799 RNU6-433P RF00026-544 RF00017-3194 EML6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227799 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000227799 Gene

Genomic Locations for ENSG00000227799 Gene
chr2:55,224,280-55,225,908
(GRCh38/hg38)
Size:
1,629 bases
Orientation:
Plus strand

Genomic View for ENSG00000227799 Gene

Genes around ENSG00000227799 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227799 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227799 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227799 Gene

Proteins for ENSG00000227799 Gene

Post-translational modifications for ENSG00000227799 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227799 Gene

Domains & Families for ENSG00000227799 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000227799 Gene

Function for ENSG00000227799 Gene

Phenotypes From GWAS Catalog for ENSG00000227799 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227799 Gene

Localization for ENSG00000227799 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227799 Gene

Pathways & Interactions for ENSG00000227799 Gene

PathCards logo

SuperPathways for ENSG00000227799 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000227799 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000227799 Gene

Drugs & Compounds for ENSG00000227799 Gene

No Compound Related Data Available

Transcripts for ENSG00000227799 Gene

mRNA/cDNA for ENSG00000227799 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227799 Gene

No ASD Table

Relevant External Links for ENSG00000227799 Gene

GeneLoc Exon Structure for
ENSG00000227799

Expression for ENSG00000227799 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227799 Gene

Orthologs for ENSG00000227799 Gene

Evolution for ENSG00000227799 Gene

ENSEMBL:
Gene Tree for ENSG00000227799 (if available)
TreeFam:
Gene Tree for ENSG00000227799 (if available)

No data available for Orthologs for ENSG00000227799 Gene

Paralogs for ENSG00000227799 Gene

No data available for Paralogs for ENSG00000227799 Gene

Variants for ENSG00000227799 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227799 Gene

Disorders for ENSG00000227799 Gene

No disorders were found for ENSG00000227799 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227799 Gene

Publications for ENSG00000227799 Gene

No publications were found for ENSG00000227799 Gene.

No data available for Mastermind for ENSG00000227799 Gene

Products for ENSG00000227799 Gene

Sources for ENSG00000227799 Gene