Aliases for ENSG00000227719 Gene

Subcategory (RNA class) for ENSG00000227719 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000227719 Gene

  • Novel Transcript 5
  • NONHSAG046919 92
  • HSALNG0056082 167
  • AC006042.1 5

External Ids for ENSG00000227719 Gene

Previous GeneCards Identifiers for ENSG00000227719 Gene

  • GC07P008153

Summaries for ENSG00000227719 Gene

GeneCards Summary for ENSG00000227719 Gene

ENSG00000227719 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000227719 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000227719 Gene

Genomics for ENSG00000227719 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227719 Gene

Promoters and enhancers for ENSG00000227719 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J008114 Enhancer 1.2 Ensembl ENCODE dbSUPER 500.7 +1.1 1076 3.4 SP1 EP300 JUND RELA MEF2C RCOR1 TRIM22 POLR2A BCL11A CBFB ENSG00000227719 piR-48209-622 ICA1
GH07J008112 Enhancer 0.2 Ensembl 500.7 -1.1 -1124 0.2 ENSG00000227719 piR-61945-448
GH07J008189 Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.6 +76.3 76276 2.6 RXRA CTCF SIN3A REST RAD21 TRIM22 TEAD1 SMC3 ZNF585B ARNT ENSG00000227719 MIOS ENSG00000233108 GLCCI1 piR-43164-060 lnc-RPA3-6 ICA1 lnc-RPA3-8
GH07J008174 Enhancer 1.2 FANTOM5 ENCODE 12.1 +62.8 62848 4.3 ZBTB40 GTF2E2 EP300 RELA MEF2C RCOR1 POLR2A MXI1 FOXA2 BCL11A ENSG00000227719 GLCCI1 lnc-RPA3-6 piR-43164-060 ICA1 lnc-RPA3-8
GH07J008201 Enhancer 1.1 Ensembl ENCODE dbSUPER 10.8 +88.0 87976 1.2 MYC CTBP1 NCOR1 NEUROD1 TRIM24 FOS MAX TAL1 ELF1 POLR2A GLCCI1 ENSG00000227719 ENSG00000233108 piR-43164-060 lnc-RPA3-7 ICA1 lnc-RPA3-8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227719 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227719 Gene

Genomic Locations for ENSG00000227719 Gene
chr7:8,114,025-8,116,561
(GRCh38/hg38)
Size:
2,537 bases
Orientation:
Plus strand
chr7:8,153,655-8,156,191
(GRCh37/hg19)
Size:
2,537 bases
Orientation:
Plus strand

Genomic View for ENSG00000227719 Gene

Genes around ENSG00000227719 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227719 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227719 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227719 Gene

Proteins for ENSG00000227719 Gene

Post-translational modifications for ENSG00000227719 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227719 Gene

Domains & Families for ENSG00000227719 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000227719 Gene

Function for ENSG00000227719 Gene

Phenotypes From GWAS Catalog for ENSG00000227719 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227719 Gene

Localization for ENSG00000227719 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227719 Gene

Pathways & Interactions for ENSG00000227719 Gene

PathCards logo

SuperPathways for ENSG00000227719 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000227719 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000227719 Gene

Drugs & Compounds for ENSG00000227719 Gene

No Compound Related Data Available

Transcripts for ENSG00000227719 Gene

mRNA/cDNA for ENSG00000227719 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227719 Gene

No ASD Table

Relevant External Links for ENSG00000227719 Gene

GeneLoc Exon Structure for
ENSG00000227719

Expression for ENSG00000227719 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000227719 Gene

genes like me logo Genes that share expression patterns with ENSG00000227719: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227719 Gene

Orthologs for ENSG00000227719 Gene

Evolution for ENSG00000227719 Gene

ENSEMBL:
Gene Tree for ENSG00000227719 (if available)
TreeFam:
Gene Tree for ENSG00000227719 (if available)

No data available for Orthologs for ENSG00000227719 Gene

Paralogs for ENSG00000227719 Gene

No data available for Paralogs for ENSG00000227719 Gene

Variants for ENSG00000227719 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227719 Gene

Disorders for ENSG00000227719 Gene

No disorders were found for ENSG00000227719 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227719 Gene

Publications for ENSG00000227719 Gene

No publications were found for ENSG00000227719 Gene.

No data available for Mastermind for ENSG00000227719 Gene

Products for ENSG00000227719 Gene

Sources for ENSG00000227719 Gene