Aliases for ENSG00000227705 Gene

Subcategory (RNA class) for ENSG00000227705 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000227705 Gene

  • Novel Transcript, Antisense To TSHZ2 5
  • NONHSAG032050 92
  • HSALNG0130920 167
  • Lnc-ZNF217-3 168
  • AL391097.2 5

External Ids for ENSG00000227705 Gene

Previous GeneCards Identifiers for ENSG00000227705 Gene

  • GC20M051812

Summaries for ENSG00000227705 Gene

GeneCards Summary for ENSG00000227705 Gene

ENSG00000227705 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000227705 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000227705 Gene

Genomics for ENSG00000227705 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227705 Gene

Promoters and enhancers for ENSG00000227705 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J053208 Enhancer 0.7 Ensembl ENCODE 500.7 +0.5 504 2 CTCF REST ZNF341 YY1 PKNOX1 RAD21 ZNF143 SPI1 ENSG00000227705 ENSG00000223492 TSHZ2
GH20J053210 Enhancer 0.2 Ensembl 500.7 -1.2 -1196 0.6 ENSG00000227705 HE856071 TSHZ2
GH20J053161 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas 10.9 +46.3 46308 1.8 CTCF ZSCAN5C ZNF639 ZNF10 SIX5 ZNF263 AFF1 TRIM28 HES1 MYC TSHZ2 ENSG00000227705 ENSG00000223492 ENSG00000286865
GH20J053327 Enhancer 1.2 FANTOM5 Ensembl ENCODE 9.7 -121.5 -121496 5.2 ZBTB40 ZNF217 ZNF623 REST CUX1 CTBP1 JUN RBM25 HDAC3 NCOR1 ENSG00000227705 lnc-PFDN4-13 LOC105372670 ENSG00000271774 TSHZ2
GH20J053141 Enhancer 1.1 UCNEbase Ensembl 10.8 +66.6 66550 1.7 USF1 REST USF2 TOE1 HINFP NFYB ZNF341 RBM25 RAD51 MAX ENSG00000286865 ENSG00000223492 TSHZ2 ENSG00000227705
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227705 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227705 Gene

Genomic Locations for ENSG00000227705 Gene
chr20:53,196,229-53,208,705
(GRCh38/hg38)
Size:
12,477 bases
Orientation:
Minus strand
chr20:51,812,768-51,825,244
(GRCh37/hg19)
Size:
12,477 bases
Orientation:
Minus strand

Genomic View for ENSG00000227705 Gene

Genes around ENSG00000227705 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227705 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227705 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227705 Gene

Proteins for ENSG00000227705 Gene

Post-translational modifications for ENSG00000227705 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227705 Gene

Domains & Families for ENSG00000227705 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000227705 Gene

Function for ENSG00000227705 Gene

Phenotypes From GWAS Catalog for ENSG00000227705 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227705 Gene

Localization for ENSG00000227705 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227705 Gene

Pathways & Interactions for ENSG00000227705 Gene

PathCards logo

SuperPathways for ENSG00000227705 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000227705 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000227705 Gene

Drugs & Compounds for ENSG00000227705 Gene

No Compound Related Data Available

Transcripts for ENSG00000227705 Gene

mRNA/cDNA for ENSG00000227705 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227705 Gene

No ASD Table

Relevant External Links for ENSG00000227705 Gene

GeneLoc Exon Structure for
ENSG00000227705

Expression for ENSG00000227705 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000227705 Gene

genes like me logo Genes that share expression patterns with ENSG00000227705: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227705 Gene

Orthologs for ENSG00000227705 Gene

Evolution for ENSG00000227705 Gene

ENSEMBL:
Gene Tree for ENSG00000227705 (if available)
TreeFam:
Gene Tree for ENSG00000227705 (if available)

No data available for Orthologs for ENSG00000227705 Gene

Paralogs for ENSG00000227705 Gene

No data available for Paralogs for ENSG00000227705 Gene

Variants for ENSG00000227705 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227705 Gene

Disorders for ENSG00000227705 Gene

No disorders were found for ENSG00000227705 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227705 Gene

Publications for ENSG00000227705 Gene

No publications were found for ENSG00000227705 Gene.

No data available for Mastermind for ENSG00000227705 Gene

Products for ENSG00000227705 Gene

Sources for ENSG00000227705 Gene