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Aliases for ENSG00000227687 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000227687 Gene

  • Novel Transcript 5
  • AL713965.1 5

External Ids for ENSG00000227687 Gene

Summaries for ENSG00000227687 Gene

GeneCards Summary for ENSG00000227687 Gene

ENSG00000227687 is an RNA Gene.

Additional gene information for ENSG00000227687 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227687 Gene

Genomics for ENSG00000227687 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227687 Gene

Promoters and enhancers for ENSG00000227687 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J205936 Enhancer 0.8 Ensembl dbSUPER 600.7 +2.0 1973 1.4 PRDM1 CEBPB SCRT2 JUN SP1 RCOR1 JUND MAZ TCF7L2 FOSL2 ENSG00000227687 PM20D1 RAB29 ELK4 SLC26A9-AS1 SLC26A9
GH01J205935 Promoter/Enhancer 0.7 EPDnew dbSUPER 600.7 +0.8 798 0.1 ENSG00000227687 SLC26A9-AS1 SLC26A9 RAB29
GH01J205791 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.3 -141.7 -141728 3.6 CC2D1A CTCF RAD21 ARID2 ZNF143 REST TRIM22 ZNF24 ZNF561 SCRT2 PM20D1 RAB29 ELK4 DSTYK EIF2D ENSG00000227687 SLC26A9 NUCKS1 MFSD4A CDK18
GH01J205858 Enhancer 0.6 Ensembl ENCODE 10.7 -76.2 -76227 2.6 PRDM10 CTCF RAD21 SLC41A1 ENSG00000227687 SLC26A9 NUCKS1 RAB29 LOC284581 PM20D1
GH01J205930 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 -2.9 -2925 6.4 ZNF148 CEBPG MAFK FOSL2 HMG20B CREB1 CEBPA PKNOX1 ZNF24 SMARCC1 PM20D1 AVPR1B ENSG00000226780 RAB29 RNU6-418P ELK4 ENSG00000227687 SLC26A9-AS1 SLC26A9 LOC284581
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227687 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227687 Gene

Genomic Locations for ENSG00000227687 Gene
chr1:205,935,128-205,935,768
(GRCh38/hg38)
Size:
641 bases
Orientation:
Plus strand
chr1:205,904,256-205,904,896
(GRCh37/hg19)
Size:
641 bases
Orientation:
Plus strand

Genomic View for ENSG00000227687 Gene

Genes around ENSG00000227687 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227687 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227687 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227687 Gene

Proteins for ENSG00000227687 Gene

Post-translational modifications for ENSG00000227687 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227687 Gene

Domains & Families for ENSG00000227687 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227687 Gene

Function for ENSG00000227687 Gene

Phenotypes From GWAS Catalog for ENSG00000227687 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227687 Gene

Localization for ENSG00000227687 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227687 Gene

Pathways & Interactions for ENSG00000227687 Gene

PathCards logo

SuperPathways for ENSG00000227687 Gene

No Data Available

Interacting Proteins for ENSG00000227687 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227687 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227687 Gene

Drugs & Compounds for ENSG00000227687 Gene

No Compound Related Data Available

Transcripts for ENSG00000227687 Gene

mRNA/cDNA for ENSG00000227687 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227687 Gene

No ASD Table

Relevant External Links for ENSG00000227687 Gene

GeneLoc Exon Structure for
ENSG00000227687

Expression for ENSG00000227687 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227687 Gene

mRNA expression in normal human tissues for ENSG00000227687 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000227687 Gene

This gene is overexpressed in Stomach (x25.7), Lung (x10.5), and Minor Salivary Gland (x6.4).
genes like me logo Genes that share expression patterns with ENSG00000227687: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227687 Gene

Orthologs for ENSG00000227687 Gene

Evolution for ENSG00000227687 Gene

ENSEMBL:
Gene Tree for ENSG00000227687 (if available)
TreeFam:
Gene Tree for ENSG00000227687 (if available)

No data available for Orthologs for ENSG00000227687 Gene

Paralogs for ENSG00000227687 Gene

No data available for Paralogs for ENSG00000227687 Gene

Variants for ENSG00000227687 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227687 Gene

Disorders for ENSG00000227687 Gene

No disorders were found for ENSG00000227687 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227687 Gene

Publications for ENSG00000227687 Gene

No publications were found for ENSG00000227687 Gene.

No data available for External Links for ENSG00000227687 Gene

Products for ENSG00000227687 Gene

Sources for ENSG00000227687 Gene

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