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Aliases for ENSG00000227589 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000227589 Gene

  • Novel Transcript 5
  • AL136528.1 5

External Ids for ENSG00000227589 Gene

Previous GeneCards Identifiers for ENSG00000227589 Gene

  • GC01M003575

Summaries for ENSG00000227589 Gene

GeneCards Summary for ENSG00000227589 Gene

ENSG00000227589 is an RNA Gene.

Additional gene information for ENSG00000227589 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227589 Gene

Genomics for ENSG00000227589 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227589 Gene

Promoters and enhancers for ENSG00000227589 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J003668 Promoter/Enhancer 1.5 Ensembl ENCODE 600.7 -0.2 -229 0.4 ELF3 MNT CEBPG RERE NFIB MYC TFE3 SP7 SP1 PPARG ENSG00000227589 LOC105378609 TP73
GH01J003746 Promoter/Enhancer 1.4 Ensembl ENCODE 10.6 -77.9 -77929 3.4 SP1 ZFX NKRF MLLT1 ZNF687 ZBTB7A KLF14 KAT8 GLIS2 POLR2A TP73-AS1 CCDC27 GC01P003748 DFFB ENSG00000235131 TP73 ENSG00000227589 WRAP73
GH01J003539 Enhancer 0.7 ENCODE dbSUPER 11 +128.7 128749 2.4 ZIC2 ZSCAN4 POLR2A MCM3 CBX1 ZMYM3 MEGF6 C1orf174 MIR551A TPRG1L ENSG00000238260 ENSG00000227589 LOC105378608 GC01M003505
GH01J003540 Enhancer 0.7 ENCODE dbSUPER 11 +130.1 130060 0.2 ZIC2 ZSCAN4 MCM3 POLR2A GLIS1 C1orf174 MIR551A ENSG00000238260 TPRG1L MEGF6 ENSG00000227589 TP73-AS1 LOC105378608 GC01M003505
GH01J003538 Enhancer 0.7 ENCODE dbSUPER 11 +130.3 130340 0.2 ZIC2 ZSCAN4 POLR2A GLIS1 MIR551A ENSG00000238260 TPRG1L MEGF6 ENSG00000227589 LOC105378608 GC01M003505
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227589 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227589 Gene

Genomic Locations for ENSG00000227589 Gene
chr1:3,658,938-3,668,772
(GRCh38/hg38)
Size:
9,835 bases
Orientation:
Minus strand
chr1:3,575,502-3,585,336
(GRCh37/hg19)
Size:
9,835 bases
Orientation:
Minus strand

Genomic View for ENSG00000227589 Gene

Genes around ENSG00000227589 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227589 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227589 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227589 Gene

Proteins for ENSG00000227589 Gene

Post-translational modifications for ENSG00000227589 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227589 Gene

Domains & Families for ENSG00000227589 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227589 Gene

Function for ENSG00000227589 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227589 Gene

Localization for ENSG00000227589 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227589 Gene

Pathways & Interactions for ENSG00000227589 Gene

PathCards logo

SuperPathways for ENSG00000227589 Gene

No Data Available

Interacting Proteins for ENSG00000227589 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227589 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227589 Gene

Drugs & Compounds for ENSG00000227589 Gene

No Compound Related Data Available

Transcripts for ENSG00000227589 Gene

mRNA/cDNA for ENSG00000227589 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227589 Gene

No ASD Table

Relevant External Links for ENSG00000227589 Gene

GeneLoc Exon Structure for
ENSG00000227589

Expression for ENSG00000227589 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227589 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000227589 Gene

This gene is overexpressed in Pituitary (x21.0) and Whole Blood (x5.5).
genes like me logo Genes that share expression patterns with ENSG00000227589: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227589 Gene

Orthologs for ENSG00000227589 Gene

Evolution for ENSG00000227589 Gene

ENSEMBL:
Gene Tree for ENSG00000227589 (if available)
TreeFam:
Gene Tree for ENSG00000227589 (if available)

No data available for Orthologs for ENSG00000227589 Gene

Paralogs for ENSG00000227589 Gene

No data available for Paralogs for ENSG00000227589 Gene

Variants for ENSG00000227589 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227589 Gene

Disorders for ENSG00000227589 Gene

No disorders were found for ENSG00000227589 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227589 Gene

Publications for ENSG00000227589 Gene

No publications were found for ENSG00000227589 Gene.

No data available for External Links for ENSG00000227589 Gene

Products for ENSG00000227589 Gene

Sources for ENSG00000227589 Gene

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