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Aliases for ENSG00000227562 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000227562 Gene

  • Novel Transcript 5
  • AC074257.1 5

External Ids for ENSG00000227562 Gene

Previous GeneCards Identifiers for ENSG00000227562 Gene

  • GC07M151647

Summaries for ENSG00000227562 Gene

GeneCards Summary for ENSG00000227562 Gene

ENSG00000227562 is an RNA Gene.

Additional gene information for ENSG00000227562 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227562 Gene

Genomics for ENSG00000227562 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227562 Gene

Promoters and enhancers for ENSG00000227562 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J151956 Promoter 0.8 EPDnew 615.1 -1.4 -1442 0.1 ZNF629 CREB1 ZNF189 ZFP37 ENSG00000227562 GALNTL5 LOC105375570 LOC105375571 ENSG00000276213
GH07J151957 Enhancer 0.4 ENCODE 607.3 -0.7 -666 0.2 NR2F2 NRF1 ENSG00000227562 GALNTL5 LOC105375570 LOC105375571
GH07J151955 Enhancer 0.3 ENCODE 600.7 -0.3 -326 0.2 NRF1 ENSG00000227562 GALNTL5 LOC105375570 LOC105375571
GH07J151792 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.5 +160.6 160584 12.4 CEBPG NCOA3 SP7 SP1 FOSL2 CREB1 PKNOX1 RXRA RELA ZIC2 PRKAG2 PRKAG2-AS1 RNU6-604P ENSG00000227562 GALNTL5 LOC644090 FABP5P3 RHEB GC07M151797 GC07M151742
GH07J151931 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 12.3 +22.5 22521 1.4 SP7 PRDM1 ZNF600 PRDM10 CTCF ZEB2 ZNF629 CTBP1 ZNF341 CEBPB PRKAG2 NUB1 ENSG00000227562 GALNTL5 RNU6-604P LOC644090 ENSG00000244151 KMT2C RHEB ENSG00000222941
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227562 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227562 Gene

Genomic Locations for ENSG00000227562 Gene
chr7:151,950,386-151,954,985
(GRCh38/hg38)
Size:
4,600 bases
Orientation:
Minus strand
chr7:151,647,471-151,652,070
(GRCh37/hg19)
Size:
4,600 bases
Orientation:
Minus strand

Genomic View for ENSG00000227562 Gene

Genes around ENSG00000227562 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227562 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227562 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227562 Gene

Proteins for ENSG00000227562 Gene

Post-translational modifications for ENSG00000227562 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227562 Gene

Domains & Families for ENSG00000227562 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227562 Gene

Function for ENSG00000227562 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227562 Gene

Localization for ENSG00000227562 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227562 Gene

Pathways & Interactions for ENSG00000227562 Gene

PathCards logo

SuperPathways for ENSG00000227562 Gene

No Data Available

Interacting Proteins for ENSG00000227562 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227562 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227562 Gene

Drugs & Compounds for ENSG00000227562 Gene

No Compound Related Data Available

Transcripts for ENSG00000227562 Gene

mRNA/cDNA for ENSG00000227562 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227562 Gene

No ASD Table

Relevant External Links for ENSG00000227562 Gene

GeneLoc Exon Structure for
ENSG00000227562

Expression for ENSG00000227562 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227562 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000227562 Gene

This gene is overexpressed in Testis (x53.0).
genes like me logo Genes that share expression patterns with ENSG00000227562: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227562 Gene

Orthologs for ENSG00000227562 Gene

Evolution for ENSG00000227562 Gene

ENSEMBL:
Gene Tree for ENSG00000227562 (if available)
TreeFam:
Gene Tree for ENSG00000227562 (if available)

No data available for Orthologs for ENSG00000227562 Gene

Paralogs for ENSG00000227562 Gene

No data available for Paralogs for ENSG00000227562 Gene

Variants for ENSG00000227562 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227562 Gene

Disorders for ENSG00000227562 Gene

No disorders were found for ENSG00000227562 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227562 Gene

Publications for ENSG00000227562 Gene

No publications were found for ENSG00000227562 Gene.

No data available for External Links for ENSG00000227562 Gene

Products for ENSG00000227562 Gene

Sources for ENSG00000227562 Gene

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