Aliases for ENSG00000227365 Gene

Subcategory (RNA class) for ENSG00000227365 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000227365 Gene

  • Novel Transcript, Antisense To CNPY1 5
  • NONHSAG049253 94
  • HSALNG0062589 169
  • AC008060.2 5
  • Lnc-EN2-1 170

External Ids for ENSG00000227365 Gene

Previous GeneCards Identifiers for ENSG00000227365 Gene

  • GC07P155302

Summaries for ENSG00000227365 Gene

GeneCards Summary for ENSG00000227365 Gene

ENSG00000227365 is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with ENSG00000227365 include Clear Cell Renal Cell Carcinoma.

Additional gene information for ENSG00000227365 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000227365 Gene

Genomics for ENSG00000227365 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227365 Gene

Promoters and enhancers for ENSG00000227365 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J155510 Promoter/Enhancer 1.1 Ensembl ENCODE 750.6 -0.4 -382 0.6 POU5F1 SP7 ZSCAN21 PRDM1 ZBTB8A TCF7L2 PRDM10 ZEB2 PATZ1 CTCF ENSG00000227365 PAXIP1-AS1 lnc-CNPY1-2 CNPY1 ENSG00000283128
GH07J155509 Enhancer 0.6 ENCODE 750.6 -0.8 -762 0.2 PRDM1 PKNOX1 ZBTB8A PRDM10 PATZ1 EZH2 ZNF366 ZNF335 ZNF398 KLF16 ENSG00000227365 lnc-CNPY1-2 CNPY1 ENSG00000283128
GH07J155203 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 14.9 -303.4 -303425 5.8 SP1 ZBTB40 ZBTB6 SMARCE1 POLR2A CTBP1 HCFC1 MYC CC2D1A ETV6 PAXIP1 PAXIP1-AS2 RBM33 PAXIP1-AS1 ENSG00000227365 LOC105375589 BLACE ENSG00000236408 ENSG00000273183 ENSG00000228521
GH07J155471 Enhancer 1 VISTA Ensembl ENCODE 11.4 -38.0 -38007 1.8 GLIS2 ZIC2 ZBTB8A TCF7L2 ZSCAN4 POLR2A EZH2 FOS GLIS1 ENSG00000227365 CNPY1 BLACE HSALNG0062585 lnc-CNPY1-2
GH07J155380 Enhancer 0.9 Ensembl ENCODE 10.7 -130.1 -130063 1.2 CTCF MYC MAX RAD21 SP1 PRDM1 DPF2 RNF2 REST TRIM22 ENSG00000218672 HSALNG0062575 EN2 ENSG00000236544 ENSG00000227365
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227365 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227365 Gene

Genomic Locations for ENSG00000227365 Gene
chr7:155,510,283-155,518,623
(GRCh38/hg38)
Size:
8,341 bases
Orientation:
Plus strand
chr7:155,302,978-155,311,318
(GRCh37/hg19)
Size:
8,341 bases
Orientation:
Plus strand

Genomic View for ENSG00000227365 Gene

Genes around ENSG00000227365 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227365 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227365 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227365 Gene

Proteins for ENSG00000227365 Gene

Post-translational modifications for ENSG00000227365 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227365 Gene

Domains & Families for ENSG00000227365 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000227365 Gene

Function for ENSG00000227365 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227365 Gene

Localization for ENSG00000227365 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227365 Gene

Pathways & Interactions for ENSG00000227365 Gene

PathCards logo

SuperPathways for ENSG00000227365 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000227365 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227365 Gene

Drugs & Compounds for ENSG00000227365 Gene

No Compound Related Data Available

Transcripts for ENSG00000227365 Gene

mRNA/cDNA for ENSG00000227365 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(1) LNCipedia transcripts :
(2) NONCODE transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227365 Gene

No ASD Table

Relevant External Links for ENSG00000227365 Gene

GeneLoc Exon Structure for
ENSG00000227365

Expression for ENSG00000227365 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227365 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000227365 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x29.0) and Brain - Cerebellum (x20.2).
genes like me logo Genes that share expression patterns with ENSG00000227365: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227365 Gene

Orthologs for ENSG00000227365 Gene

Evolution for ENSG00000227365 Gene

ENSEMBL:
Gene Tree for ENSG00000227365 (if available)
TreeFam:
Gene Tree for ENSG00000227365 (if available)

No data available for Orthologs for ENSG00000227365 Gene

Paralogs for ENSG00000227365 Gene

No data available for Paralogs for ENSG00000227365 Gene

Variants for ENSG00000227365 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227365 Gene

Disorders for ENSG00000227365 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ENSG00000227365 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
clear cell renal cell carcinoma
  • clear cell carcinoma of kidney
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ENSG00000227365: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227365 Gene

Publications for ENSG00000227365 Gene

No publications were found for ENSG00000227365 Gene.

No data available for External Links for ENSG00000227365 Gene

Products for ENSG00000227365 Gene

Sources for ENSG00000227365 Gene