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Aliases for ENSG00000227278 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000227278 Gene

  • AL603839.1 5

External Ids for ENSG00000227278 Gene

Previous GeneCards Identifiers for ENSG00000227278 Gene

  • GC01M040980

Summaries for ENSG00000227278 Gene

GeneCards Summary for ENSG00000227278 Gene

ENSG00000227278 is an RNA Gene.

Additional gene information for ENSG00000227278 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227278 Gene

Genomics for ENSG00000227278 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227278 Gene

Promoters and enhancers for ENSG00000227278 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J040449 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.6 +64.5 64467 2.5 HDGF PKNOX1 ARID4B SIN3A ZNF2 IRF4 YY1 POLR2B CBX5 ZNF207 ENSG00000284677 ZFP69B EXO5 LOC105378672 PPIEL ZFP69 PPIE ENSG00000227278 ENSG00000238186 RLF
GH01J040476 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 11.7 +37.5 37539 1.4 PKNOX1 ARID4B SIN3A ZNF2 YY1 POLR2B E2F8 ZNF207 ZNF143 SP3 ZFP69 EXO5 PPIE PPIEL TRIT1 LOC105378672 ENSG00000227278 ENSG00000238186 ZNF684 RLF
GH01J040421 Enhancer 1.3 Ensembl ENCODE dbSUPER 10.7 +92.5 92466 2.5 FOXA2 MLX ARID4B FEZF1 DMAP1 ZNF48 ETS1 YY1 NFKBIZ RXRA ZFP69 PPIE EXO5 ZFP69B NFYC SMAP2 ENSG00000227278 ENSG00000238186 LOC105378672 LOC101929516
GH01J040583 Enhancer 0.7 ENCODE 11 -68.6 -68576 0.9 HDAC1 ATF1 GTF2E2 TEAD4 TAL1 JUN CEBPG FOSL1 CTBP1 TRIM24 GC01P040586 ZFP69 ZNF684 ENSG00000227278 ENSG00000238186 EXO5 LOC105378672 NFYC MIR30C1 MIR30E
GH01J040574 Enhancer 0.5 ENCODE 11.3 -59.9 -59927 0.2 CTBP1 ZNF766 SOX6 IKZF1 ZFP69 ENSG00000227278 ENSG00000238186 ZNF684 EXO5 LOC105378672 GC01P040586 LOC105378673
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227278 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227278 Gene

Genomic Locations for ENSG00000227278 Gene
chr1:40,514,461-40,515,057
(GRCh38/hg38)
Size:
597 bases
Orientation:
Minus strand
chr1:40,980,133-40,980,729
(GRCh37/hg19)
Size:
597 bases
Orientation:
Minus strand

Genomic View for ENSG00000227278 Gene

Genes around ENSG00000227278 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227278 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227278 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227278 Gene

Proteins for ENSG00000227278 Gene

Post-translational modifications for ENSG00000227278 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227278 Gene

Domains & Families for ENSG00000227278 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227278 Gene

Function for ENSG00000227278 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227278 Gene

Localization for ENSG00000227278 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227278 Gene

Pathways & Interactions for ENSG00000227278 Gene

SuperPathways for ENSG00000227278 Gene

No Data Available

Interacting Proteins for ENSG00000227278 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227278 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227278 Gene

Drugs & Compounds for ENSG00000227278 Gene

No Compound Related Data Available

Transcripts for ENSG00000227278 Gene

mRNA/cDNA for ENSG00000227278 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227278 Gene

No ASD Table

Relevant External Links for ENSG00000227278 Gene

GeneLoc Exon Structure for
ENSG00000227278

Expression for ENSG00000227278 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227278 Gene

genes like me logo Genes that share expression patterns with ENSG00000227278: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227278 Gene

Orthologs for ENSG00000227278 Gene

Evolution for ENSG00000227278 Gene

ENSEMBL:
Gene Tree for ENSG00000227278 (if available)
TreeFam:
Gene Tree for ENSG00000227278 (if available)

No data available for Orthologs for ENSG00000227278 Gene

Paralogs for ENSG00000227278 Gene

No data available for Paralogs for ENSG00000227278 Gene

Variants for ENSG00000227278 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227278 Gene

Disorders for ENSG00000227278 Gene

No disorders were found for ENSG00000227278 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227278 Gene

Publications for ENSG00000227278 Gene

No publications were found for ENSG00000227278 Gene.

Products for ENSG00000227278 Gene

Sources for ENSG00000227278 Gene

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