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Aliases for ENSG00000227163 Gene

Subcategory (RNA class) for ENSG00000227163 Gene

lncRNA

Aliases for ENSG00000227163 Gene

  • Pseudogene Similar To Part Of ATP Synthase, H+ Transporting, Mitochondrial F0 Complex, Subunit C (Subunit 9), Isoform 1 (ATP5G1) 5
  • AL139220.1 5

External Ids for ENSG00000227163 Gene

ORGUL Members for ENSG00000227163 Gene

Previous GeneCards Identifiers for ENSG00000227163 Gene

  • GC01M044553

Summaries for ENSG00000227163 Gene

GeneCards Summary for ENSG00000227163 Gene

ENSG00000227163 is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000227163 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000227163 Gene

Genomics for ENSG00000227163 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227163 Gene

Promoters and enhancers for ENSG00000227163 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J044089 Enhancer 1 Ensembl ENCODE 600.7 -1.2 -1224 2.6 MLLT1 ZSCAN21 MAFK SP7 GLIS2 GMEB1 RNF2 ZSCAN4 ZEB2 ZNF776 ENSG00000227163 DMAP1 SZT2 RPS8 SLC6A9 ENSG00000230615 KRT8P47 KLF17
GH01J044047 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.3 +39.5 39501 3.5 CC2D1A CTCF CBFA2T2 MLLT1 GTF2F1 CSDE1 CDC5L NCOA6 TRIM24 ZNF639 KLF17 ENSG00000237950 IPO13 ARTN ENSG00000230615 B4GALT2 ENSG00000227163
GH01J044067 Enhancer 1 Ensembl ENCODE 0.4 +17.4 17376 8.2 ZNF652 CBFA2T2 ZNF121 NCOA3 SP7 RELA SP1 PRDM1 EGR1 SMARCA4 SLC6A9 ARTN ERI3 ENSG00000230615 ATP6V0B ENSG00000227163 KLF17
GH01J044085 Enhancer 0.6 Ensembl 0.7 +3.0 2977 0.6 TRIM24 PRDM1 ZNF316 CEBPB JUN JUND MAX IKZF1 ENSG00000230615 ENSG00000227163 KLF17
GH01J044044 Enhancer 1.1 Ensembl ENCODE 0.3 +43.9 43877 2 ZNF473 CBFA2T2 MLLT1 GTF2F1 CSDE1 BACH1 NCOA6 TRIM24 EGR1 SMARCA4 KLF17 DMAP1 SZT2 IPO13 ENSG00000237950 ENSG00000230615 B4GALT2 ENSG00000227163
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227163 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227163 Gene

Genomic Locations for ENSG00000227163 Gene
chr1:44,087,958-44,088,477
(GRCh38/hg38)
Size:
520 bases
Orientation:
Minus strand
chr1:44,553,630-44,554,149
(GRCh37/hg19)
Size:
520 bases
Orientation:
Minus strand

Genomic View for ENSG00000227163 Gene

Genes around ENSG00000227163 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227163 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227163 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227163 Gene

Proteins for ENSG00000227163 Gene

Post-translational modifications for ENSG00000227163 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227163 Gene

Domains & Families for ENSG00000227163 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000227163 Gene

Function for ENSG00000227163 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227163 Gene

Localization for ENSG00000227163 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227163 Gene

Pathways & Interactions for ENSG00000227163 Gene

PathCards logo

SuperPathways for ENSG00000227163 Gene

No Data Available

Interacting Proteins for ENSG00000227163 Gene

Gene Ontology (GO) - Biological Process for ENSG00000227163 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227163 Gene

Drugs & Compounds for ENSG00000227163 Gene

No Compound Related Data Available

Transcripts for ENSG00000227163 Gene

mRNA/cDNA for ENSG00000227163 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227163 Gene

No ASD Table

Relevant External Links for ENSG00000227163 Gene

GeneLoc Exon Structure for
ENSG00000227163

Expression for ENSG00000227163 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227163 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000227163 Gene

This gene is overexpressed in Adrenal Gland (x14.4), Bladder (x6.0), Esophagus - Muscularis (x5.8), Lung (x5.1), and Testis (x4.4).
genes like me logo Genes that share expression patterns with ENSG00000227163: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227163 Gene

Orthologs for ENSG00000227163 Gene

Evolution for ENSG00000227163 Gene

ENSEMBL:
Gene Tree for ENSG00000227163 (if available)
TreeFam:
Gene Tree for ENSG00000227163 (if available)

No data available for Orthologs for ENSG00000227163 Gene

Paralogs for ENSG00000227163 Gene

No data available for Paralogs for ENSG00000227163 Gene

Variants for ENSG00000227163 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227163 Gene

Disorders for ENSG00000227163 Gene

No disorders were found for ENSG00000227163 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227163 Gene

Publications for ENSG00000227163 Gene

No publications were found for ENSG00000227163 Gene.

No data available for External Links for ENSG00000227163 Gene

Products for ENSG00000227163 Gene

Sources for ENSG00000227163 Gene

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