Aliases for ENSG00000227107 Gene

Subcategory (RNA class) for ENSG00000227107 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000227107 Gene

  • Novel Transcript 5
  • NONHSAG030921 94
  • Lnc-LRRFIP1-1 170
  • HSALNG0023371 169
  • AC104667.1 5

External Ids for ENSG00000227107 Gene

Previous GeneCards Identifiers for ENSG00000227107 Gene

  • GC02P238521

Summaries for ENSG00000227107 Gene

GeneCards Summary for ENSG00000227107 Gene

ENSG00000227107 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000227107 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000227107 Gene

Genomics for ENSG00000227107 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227107 Gene

Promoters and enhancers for ENSG00000227107 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J237611 Enhancer 0.3 Ensembl 756.4 -1.5 -1476 0.6 FOXA2 ENSG00000227107 piR-37567-106 piR-56399-031 lnc-LRRFIP1-3
GH02J237624 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 7.5 +16.0 16040 9.9 NR2F6 HLF POLR2A RAD21 ELF3 TFE3 MYC PRDM1 PKNOX1 RXRA LRRFIP1 HSALNG0023373 RAB17 LOC105373958 ENSG00000227107 RBM44 lnc-RBM44-2
GH02J237612 Promoter/Enhancer 2 VISTA FANTOM5 Ensembl ENCODE dbSUPER 6.9 +3.2 3174 7.1 LCORL MLX RBPJ NR2F1 NR2F6 ATF1 CREB1 MIXL1 MYC HLF ENSG00000227107 LRRFIP1 RBM44 LOC105373958 HSALNG0023373
GH02J237660 Enhancer 1.2 ENCODE CraniofacialAtlas dbSUPER 6.1 +49.4 49398 4.3 FOXA1 RAD21 ZNF121 MNT SP1 SP7 SP5 PKNOX1 ZIC2 RFX1 RBM44 RAB17 LOC105373958 PRLH RNU6-1140P MLPH LRRFIP1 ENSG00000227107 lnc-RBM44-2
GH02J237647 Enhancer 0.7 Ensembl ENCODE dbSUPER 5.8 +35.4 35424 2 RXRA SP1 HNF4A ENSG00000227107 LRRFIP1 lnc-RBM44-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227107 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227107 Gene

Genomic Locations for ENSG00000227107 Gene
chr2:237,612,977-237,626,525
(GRCh38/hg38)
Size:
13,549 bases
Orientation:
Plus strand
chr2:238,521,620-238,535,168
(GRCh37/hg19)
Size:
13,549 bases
Orientation:
Plus strand

Genomic View for ENSG00000227107 Gene

Genes around ENSG00000227107 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227107 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227107 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227107 Gene

Proteins for ENSG00000227107 Gene

Post-translational modifications for ENSG00000227107 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227107 Gene

Domains & Families for ENSG00000227107 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000227107 Gene

Function for ENSG00000227107 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227107 Gene

Localization for ENSG00000227107 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227107 Gene

Pathways & Interactions for ENSG00000227107 Gene

PathCards logo

SuperPathways for ENSG00000227107 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000227107 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000227107 Gene

Drugs & Compounds for ENSG00000227107 Gene

No Compound Related Data Available

Transcripts for ENSG00000227107 Gene

mRNA/cDNA for ENSG00000227107 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LNCipedia transcripts :
(1) LncBook transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227107 Gene

No ASD Table

Relevant External Links for ENSG00000227107 Gene

GeneLoc Exon Structure for
ENSG00000227107

Expression for ENSG00000227107 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000227107 Gene

genes like me logo Genes that share expression patterns with ENSG00000227107: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227107 Gene

Orthologs for ENSG00000227107 Gene

Evolution for ENSG00000227107 Gene

ENSEMBL:
Gene Tree for ENSG00000227107 (if available)
TreeFam:
Gene Tree for ENSG00000227107 (if available)

No data available for Orthologs for ENSG00000227107 Gene

Paralogs for ENSG00000227107 Gene

No data available for Paralogs for ENSG00000227107 Gene

Variants for ENSG00000227107 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227107 Gene

Disorders for ENSG00000227107 Gene

No disorders were found for ENSG00000227107 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227107 Gene

Publications for ENSG00000227107 Gene

No publications were found for ENSG00000227107 Gene.

No data available for External Links for ENSG00000227107 Gene

Products for ENSG00000227107 Gene

Sources for ENSG00000227107 Gene