Aliases for ENSG00000227047 Gene

Subcategory (RNA class) for ENSG00000227047 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000227047 Gene

  • Novel Transcript 5
  • NONHSAG027163 92
  • Lnc-HS1BP3-2 168
  • AC012065.1 5

External Ids for ENSG00000227047 Gene

Previous GeneCards Identifiers for ENSG00000227047 Gene

  • GC02M020699

Summaries for ENSG00000227047 Gene

GeneCards Summary for ENSG00000227047 Gene

ENSG00000227047 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000227047 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000227047 Gene

Genomics for ENSG00000227047 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000227047 Gene

Promoters and enhancers for ENSG00000227047 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J020499 Enhancer 1.2 Ensembl ENCODE dbSUPER 500.7 0.0 -8 4.2 FOS ZNF639 ZNF10 CLOCK EP300 CTBP1 WT1 ZNF592 ZBTB17 SMARCC1 ENSG00000227047 piR-34593-021 TTC32 PUM2 HS1BP3
GH02J020581 Enhancer 1.3 ENCODE CraniofacialAtlas dbSUPER 10.8 -83.0 -82976 5.2 EP300 FOXK2 ZNF217 MYC TCF12 POLR2G NCOR1 JUND TEAD4 FOS LAPTM4A ENSG00000227047 GDF7 LINC00954 PUM2 ENSG00000269976 piR-44110-031 lnc-GDF7-4 HS1BP3
GH02J020022 Enhancer 0.6 Ensembl 10.7 +478.2 478210 3 ZNF585B TRIM28 CEBPG ZNF280A PKNOX1 ATF4 CEBPB ZFP36 SETDB1 ATF3 piR-32325-071 piR-42446 ENSG00000234378 MATN3 ENSG00000227047 TTC32 LAPTM4A-DT WDR35 piR-32285-049
GH02J020487 Enhancer 1.6 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +8.7 8667 11.7 ZNF217 EP300 TEAD4 ZFX ZIC2 POLR2A TCF7 RFX1 CTBP1 ZBTB7A lnc-HS1BP3-3 ENSG00000227047
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000227047 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000227047 Gene

Genomic Locations for ENSG00000227047 Gene
chr2:20,499,571-20,501,311
(GRCh38/hg38)
Size:
1,741 bases
Orientation:
Minus strand
chr2:20,699,331-20,701,071
(GRCh37/hg19)
Size:
1,741 bases
Orientation:
Minus strand

Genomic View for ENSG00000227047 Gene

Genes around ENSG00000227047 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000227047 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000227047 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000227047 Gene

Proteins for ENSG00000227047 Gene

Post-translational modifications for ENSG00000227047 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000227047 Gene

Domains & Families for ENSG00000227047 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000227047 Gene

Function for ENSG00000227047 Gene

Phenotypes From GWAS Catalog for ENSG00000227047 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000227047 Gene

Localization for ENSG00000227047 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000227047 Gene

Pathways & Interactions for ENSG00000227047 Gene

PathCards logo

SuperPathways for ENSG00000227047 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000227047 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000227047 Gene

Drugs & Compounds for ENSG00000227047 Gene

No Compound Related Data Available

Transcripts for ENSG00000227047 Gene

mRNA/cDNA for ENSG00000227047 Gene

2 RNACentral transcripts :
1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000227047 Gene

No ASD Table

Relevant External Links for ENSG00000227047 Gene

GeneLoc Exon Structure for
ENSG00000227047

Expression for ENSG00000227047 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000227047 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000227047 Gene

This gene is overexpressed in Adrenal Gland (x49.5).
genes like me logo Genes that share expression patterns with ENSG00000227047: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000227047 Gene

Orthologs for ENSG00000227047 Gene

Evolution for ENSG00000227047 Gene

ENSEMBL:
Gene Tree for ENSG00000227047 (if available)
TreeFam:
Gene Tree for ENSG00000227047 (if available)

No data available for Orthologs for ENSG00000227047 Gene

Paralogs for ENSG00000227047 Gene

No data available for Paralogs for ENSG00000227047 Gene

Variants for ENSG00000227047 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000227047 Gene

Disorders for ENSG00000227047 Gene

No disorders were found for ENSG00000227047 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000227047 Gene

Publications for ENSG00000227047 Gene

No publications were found for ENSG00000227047 Gene.

No data available for Mastermind for ENSG00000227047 Gene

Products for ENSG00000227047 Gene

Sources for ENSG00000227047 Gene