Aliases for ENSG00000226904 Gene

Subcategory (RNA class) for ENSG00000226904 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000226904 Gene

  • Novel Transcript 5
  • NONHSAG052488.2 91
  • HSALNG0071671 164
  • Lnc-CBWD3-1 165
  • AL353608.2 5

External Ids for ENSG00000226904 Gene

Previous GeneCards Identifiers for ENSG00000226904 Gene

  • GC09P070843

Summaries for ENSG00000226904 Gene

GeneCards Summary for ENSG00000226904 Gene

ENSG00000226904 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226904 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226904 Gene

Genomics for ENSG00000226904 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000226904 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J068356 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE CraniofacialAtlas 5.1 +128.9 128949 3.2 PRDM1 ZSCAN4 PATZ1 EZH2 ZNF341 KLF9 ZBTB20 ZBTB10 ZSCAN5C ZBTB48 PGM5 PGM5-AS1 ENSG00000226904 ANKRD20A1 lnc-TMEM252-1 TMEM252
GH09J068514 Enhancer 1 Ensembl ENCODE dbSUPER 4.9 +287.0 286950 2 CEBPG CREB1 SP1 CEBPB CTBP1 FOXA2 FOS CHD2 JUN PKNOX1 TMEM252-DT TMEM252 PRKACG ENSG00000226904 HSALNG0071689 lnc-TMEM252-4 PGM5
GH09J068462 Enhancer 0.4 Ensembl dbSUPER 4.1 +233.7 233650 1 NR2F2 ENSG00000233178 ENSG00000226904 lnc-FOXD4L3-7 lnc-TMEM252-4 TMEM252 PGM5
GH09J068306 Enhancer 0.3 Ensembl 4.2 +78.3 78327 2.4 EZH2 ENSG00000225337 ENSG00000234394 LOC107987077 piR-41427-004 ENSG00000226904 FOXD4L3 PGM5
GH09J068466 Enhancer 0.2 dbSUPER 4.1 +238.6 238586 1.4 ENSG00000233178 ENSG00000226904 lnc-TMEM252-4 lnc-FOXD4L3-7 TMEM252 PGM5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226904 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000226904 Gene

Genomic Locations for ENSG00000226904 Gene
chr9:68,228,651-68,229,312
(GRCh38/hg38)
Size:
662 bases
Orientation:
Plus strand
chr9:70,843,567-70,844,228
(GRCh37/hg19)
Size:
662 bases
Orientation:
Plus strand

Genomic View for ENSG00000226904 Gene

Genes around ENSG00000226904 on UCSC Golden Path with GeneCards custom track
ENSG00000226904 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000226904 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226904 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226904 Gene

Proteins for ENSG00000226904 Gene

Post-translational modifications for ENSG00000226904 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226904 Gene

Domains & Families for ENSG00000226904 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226904 Gene

Function for ENSG00000226904 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226904 Gene

Localization for ENSG00000226904 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226904 Gene

Pathways & Interactions for ENSG00000226904 Gene

PathCards logo

SuperPathways for ENSG00000226904 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226904 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000226904 Gene

Drugs & Compounds for ENSG00000226904 Gene

No Compound Related Data Available

Transcripts for ENSG00000226904 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000226904 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000DB59A_9606 lncRNA 340 4

Ensembl: ENST00000425587 (view in UCSC) ,

LncBook: HSALNT0149777,

LNCipedia: lnc-CBWD3-1:1,

NONCODE: NONHSAT131724.2,

ENSG00000226904 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226904 Gene

No ASD Table

Relevant External Links for ENSG00000226904 Gene

GeneLoc Exon Structure for
ENSG00000226904

No data available for mRNA/cDNA for ENSG00000226904 Gene

Expression for ENSG00000226904 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000226904 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000226904 Gene

This gene is overexpressed in Brain - Cerebellum (x5.7).
genes like me logo Genes that share expression patterns with ENSG00000226904: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226904 Gene

Orthologs for ENSG00000226904 Gene

Evolution for ENSG00000226904 Gene

ENSEMBL:
Gene Tree for ENSG00000226904 (if available)
TreeFam:
Gene Tree for ENSG00000226904 (if available)

No data available for Orthologs for ENSG00000226904 Gene

Paralogs for ENSG00000226904 Gene

No data available for Paralogs for ENSG00000226904 Gene

Variants for ENSG00000226904 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226904 Gene

Disorders for ENSG00000226904 Gene

Additional Disease Information for ENSG00000226904

No disorders were found for ENSG00000226904 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000226904 Gene

Publications for ENSG00000226904 Gene

No publications were found for ENSG00000226904 Gene.

No data available for Mastermind for ENSG00000226904 Gene

Products for ENSG00000226904 Gene

Sources for ENSG00000226904 Gene