Aliases for ENSG00000226861 Gene

Data sources for ENSG00000226861 Gene:

RNA type for ENSG00000226861 Gene

lncRNA

Aliases for ENSG00000226861 Gene

External Ids for ENSG00000226861 Gene

Previous GeneCards Identifiers for ENSG00000226861 Gene

  • GC10P008340
  • GC10P008298

Summaries for ENSG00000226861 Gene

GeneCards Summary for ENSG00000226861 Gene

ENSG00000226861 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226861 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226861 Gene

Genomics for ENSG00000226861 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000226861 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J008272 Enhancer 0.6 Ensembl ENCODE 250.7 +0.1 51 0.9 ZNF189 ZNF362 ZSCAN21 MZF1 ENSG00000226861 HSALNG0076050 LINC00708 ATP5F1C GATA3
GH10J008279 Enhancer 0.6 Ensembl ENCODE 0.4 +6.8 6838 1.2 BHLHE40 ZNF366 CHD2 HSALNG0076052 ENSG00000226861 piR-48209-057 GATA3
GH10J008295 Enhancer 0.6 ENCODE 0.4 +23.3 23337 2.5 MAFF ESRRA MAFK ZNF512B MAFG ZNF366 L3MBTL2 ZNF512 ZNF207 ZKSCAN1 HSALNG0076053 piR-48209-057 lnc-KIN-8 ENSG00000226861 GATA3
GH10J008299 Enhancer 0.7 Ensembl 0.3 +26.2 26189 0.9 ZNF600 ZNF580 FEZF1 ZNF843 PRDM6 REST GLIS1 PRDM4 GATA2 ZNF561 HSALNG0076053 lnc-KIN-8 piR-48209-057 ENSG00000226861 GATA3
GH10J008288 Enhancer 0.5 Ensembl ENCODE 0.4 +16.6 16605 2.3 ZNF366 EZH2 piR-48209-057 HSALNG0076053 ENSG00000226861 lnc-KIN-8 GATA3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226861 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000226861 Gene

Latest Assembly
chr10:8,272,991-8,301,705
(GRCh38/hg38)
Size:
28,715 bases
Orientation:
Plus strand

Previous Assembly
chr10:8,340,860-8,343,630
(GRCh37/hg19 by Ensembl)
Size:
2,771 bases
Orientation:
Plus strand

Genomic View for ENSG00000226861 Gene

Genes around ENSG00000226861 on UCSC Golden Path with GeneCards custom track
ENSG00000226861 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000226861 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226861 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226861 Gene

Proteins for ENSG00000226861 Gene

Post-translational modifications for ENSG00000226861 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226861 Gene

Domains & Families for ENSG00000226861 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226861 Gene

Function for ENSG00000226861 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226861 Gene

Localization for ENSG00000226861 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226861 Gene

Pathways & Interactions for ENSG00000226861 Gene

PathCards logo

SuperPathways for ENSG00000226861 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226861 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000226861 Gene

Drugs & Compounds for ENSG00000226861 Gene

No Compound Related Data Available

Transcripts for ENSG00000226861 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000226861 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00005234E4_9606 lncRNA 903 3

Ensembl: ENST00000413941 (view in UCSC) ,

LNCipedia: lnc-GATA3-4:1,

NONCODE: NONHSAT011322.2,

URS00009BB551_9606 lncRNA 901 2

LncBook: HSALNT0158657,

NONCODE: NONHSAT155076.1,

URS0000E93F02_9606 lncRNA 996 1

LncBook: HSALNT0158655,

URS0001BDC15F_9606 lncRNA 861 1

LncBook: HSALNT0158653,

ENSG00000226861 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226861 Gene

No ASD Table

Relevant External Links for ENSG00000226861 Gene

GeneLoc Exon Structure for
ENSG00000226861

No data available for mRNA/cDNA for ENSG00000226861 Gene

Expression for ENSG00000226861 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000226861 Gene

genes like me logo Genes that share expression patterns with ENSG00000226861: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226861 Gene

Orthologs for ENSG00000226861 Gene

Evolution for ENSG00000226861 Gene

ENSEMBL:
Gene Tree for ENSG00000226861 (if available)
TreeFam:
Gene Tree for ENSG00000226861 (if available)

No data available for Orthologs for ENSG00000226861 Gene

Paralogs for ENSG00000226861 Gene

No data available for Paralogs for ENSG00000226861 Gene

Variants for ENSG00000226861 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226861 Gene

Disorders for ENSG00000226861 Gene

No disorders were found for ENSG00000226861 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226861 Gene

Publications for ENSG00000226861 Gene

No publications were found for ENSG00000226861 Gene.

No data available for Mastermind for ENSG00000226861 Gene

Products for ENSG00000226861 Gene

Sources for ENSG00000226861 Gene