Aliases for ENSG00000226772 Gene

Data sources for ENSG00000226772 Gene:

Subcategory (RNA class) for ENSG00000226772 Gene

lncRNA

Aliases for ENSG00000226772 Gene

External Ids for ENSG00000226772 Gene

Previous GeneCards Identifiers for ENSG00000226772 Gene

  • GC22M029495

Summaries for ENSG00000226772 Gene

GeneCards Summary for ENSG00000226772 Gene

ENSG00000226772 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226772 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226772 Gene

Genomics for ENSG00000226772 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000226772 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J029112 Enhancer 0.4 Ensembl 250.7 -0.5 -518 0.4 CTCF RAD21 PRDM1 ENSG00000226772 piR-56341-139 KREMEN1 C22orf31 EMID1
GH22J029113 Enhancer 0.3 Ensembl 250.7 -1.7 -1677 1.3 FOXA2 FOXA1 ENSG00000226772 KREMEN1 RNU6-810P C22orf31 piR-56341-139 EMID1
GH22J029070 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.2 +38.5 38538 4.8 ZNF217 SIN3A VEZF1 SMAD4 SAP130 KLF7 ZEB2 RXRA ZBTB33 GABPB1 KREMEN1 C22orf31 ENSG00000226772 CCDC117 EMID1 XBP1
GH22J029028 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.7 +80.5 80453 4.8 ZBTB10 CEBPA IKZF1 ZNF217 CTCF ZIC2 HOMEZ KDM6A THAP11 FOXA2 ZNRF3-AS1 C22orf31 CCDC117 KREMEN1 ZNRF3 XBP1 ENSG00000226471 ENSG00000226772 RNU6-810P ASCC2
GH22J029077 Enhancer 1.2 Ensembl ENCODE dbSUPER 12.9 +30.5 30545 7.7 FEZF1 HES1 CTCF CEBPB ZNF395 MAFF KLF7 ZNF341 GABPA ZNF843 KREMEN1 ENSG00000226772 RNU6-810P CCDC117 EMID1 C22orf31
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226772 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000226772 Gene

Latest Assembly
chr22:29,099,040-29,111,683
(GRCh38/hg38)
Size:
12,644 bases
Orientation:
Minus strand

Previous Assembly
chr22:29,495,029-29,507,671
(GRCh37/hg19 by Ensembl)
Size:
12,643 bases
Orientation:
Minus strand

Genomic View for ENSG00000226772 Gene

Genes around ENSG00000226772 on UCSC Golden Path with GeneCards custom track
ENSG00000226772 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000226772 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226772 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226772 Gene

Proteins for ENSG00000226772 Gene

Post-translational modifications for ENSG00000226772 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226772 Gene

Domains & Families for ENSG00000226772 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226772 Gene

Function for ENSG00000226772 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226772 Gene

Localization for ENSG00000226772 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226772 Gene

Pathways & Interactions for ENSG00000226772 Gene

PathCards logo

SuperPathways for ENSG00000226772 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226772 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000226772 Gene

Drugs & Compounds for ENSG00000226772 Gene

No Compound Related Data Available

Transcripts for ENSG00000226772 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000226772 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004AC2A5_9606 lncRNA 539 4

Ensembl: ENST00000456740 (view in UCSC) ,

LncBook: HSALNT0276720,

LNCipedia: lnc-C22orf31-2:1,

NONCODE: NONHSAT084666.2,

URS0001BEEA73_9606 lncRNA 539 1

LncBook: HSALNT0276720,

ENSG00000226772 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226772 Gene

No ASD Table

Relevant External Links for ENSG00000226772 Gene

GeneLoc Exon Structure for
ENSG00000226772

No data available for mRNA/cDNA for ENSG00000226772 Gene

Expression for ENSG00000226772 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000226772 Gene

genes like me logo Genes that share expression patterns with ENSG00000226772: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226772 Gene

Orthologs for ENSG00000226772 Gene

Evolution for ENSG00000226772 Gene

ENSEMBL:
Gene Tree for ENSG00000226772 (if available)
TreeFam:
Gene Tree for ENSG00000226772 (if available)

No data available for Orthologs for ENSG00000226772 Gene

Paralogs for ENSG00000226772 Gene

No data available for Paralogs for ENSG00000226772 Gene

Variants for ENSG00000226772 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226772 Gene

Disorders for ENSG00000226772 Gene

Additional Disease Information for ENSG00000226772

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000226772 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000226772 Gene

Publications for ENSG00000226772 Gene

No publications were found for ENSG00000226772 Gene.

No data available for Mastermind for ENSG00000226772 Gene

Products for ENSG00000226772 Gene

Sources for ENSG00000226772 Gene