Aliases for ENSG00000226698 Gene

Subcategory (RNA class) for ENSG00000226698 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000226698 Gene

  • Novel Transcript 5
  • HSALNG0001945 169
  • NONHSAG000786 94
  • AL034380.1 5
  • Lnc-SFN-1 170

External Ids for ENSG00000226698 Gene

Previous GeneCards Identifiers for ENSG00000226698 Gene

  • GC01P027202

Summaries for ENSG00000226698 Gene

GeneCards Summary for ENSG00000226698 Gene

ENSG00000226698 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226698 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226698 Gene

Genomics for ENSG00000226698 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000226698 Gene

Promoters and enhancers for ENSG00000226698 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J026879 Enhancer 1 Ensembl ENCODE dbSUPER 750.6 +1.5 1459 1.6 CTCF ZNF362 RAD21 SP1 RXRA REST TRIM22 ZNF143 CEBPB JUND ENSG00000226698 PIGV ZDHHC18 piR-38703 GPN2
GH01J026874 Enhancer 0.2 Ensembl 750.6 -1.3 -1332 0.4 ENSG00000226698 lnc-SFN-2
GH01J026876 Enhancer 0.2 Ensembl 750.6 +0.3 268 0.4 ENSG00000226698 piR-38703 GPN2
GH01J026690 Promoter/Enhancer 3.1 UCNEbase EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.6 -179.2 -179191 13.1 ZNF785 SIN3A ZNF24 ZBTB40 SP1 ZBTB6 FOXA1 MLX SMARCE1 RBPJ ARID1A LOC101928728 GPN2 ACTG1P20 HMGN2 ENSG00000225891 PIGV NPM1P39 ZNF593 GPATCH3
GH01J026824 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.9 -46.5 -46477 11.1 ZNF24 SP1 ZBTB40 CTCF FOXA1 MLX RBPJ POLR2A NR2F1 CREB1 ZDHHC18 PIGV ARID1A HMGN2 SFN ENSG00000226698 ACTG1P20 WASF2 GPATCH3 NUDC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226698 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000226698 Gene

Genomic Locations for ENSG00000226698 Gene
chr1:26,876,133-26,878,245
(GRCh38/hg38)
Size:
2,113 bases
Orientation:
Plus strand
chr1:27,202,624-27,204,736
(GRCh37/hg19)
Size:
2,113 bases
Orientation:
Plus strand

Genomic View for ENSG00000226698 Gene

Genes around ENSG00000226698 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000226698 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226698 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226698 Gene

Proteins for ENSG00000226698 Gene

Post-translational modifications for ENSG00000226698 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226698 Gene

Domains & Families for ENSG00000226698 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226698 Gene

Function for ENSG00000226698 Gene

Phenotypes From GWAS Catalog for ENSG00000226698 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226698 Gene

Localization for ENSG00000226698 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226698 Gene

Pathways & Interactions for ENSG00000226698 Gene

PathCards logo

SuperPathways for ENSG00000226698 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226698 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000226698 Gene

Drugs & Compounds for ENSG00000226698 Gene

No Compound Related Data Available

Transcripts for ENSG00000226698 Gene

mRNA/cDNA for ENSG00000226698 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LncBook transcripts :
(1) LNCipedia transcripts :
(1) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226698 Gene

No ASD Table

Relevant External Links for ENSG00000226698 Gene

GeneLoc Exon Structure for
ENSG00000226698

Expression for ENSG00000226698 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000226698 Gene

genes like me logo Genes that share expression patterns with ENSG00000226698: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226698 Gene

Orthologs for ENSG00000226698 Gene

Evolution for ENSG00000226698 Gene

ENSEMBL:
Gene Tree for ENSG00000226698 (if available)
TreeFam:
Gene Tree for ENSG00000226698 (if available)

No data available for Orthologs for ENSG00000226698 Gene

Paralogs for ENSG00000226698 Gene

No data available for Paralogs for ENSG00000226698 Gene

Variants for ENSG00000226698 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226698 Gene

Disorders for ENSG00000226698 Gene

No disorders were found for ENSG00000226698 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226698 Gene

Publications for ENSG00000226698 Gene

No publications were found for ENSG00000226698 Gene.

No data available for External Links for ENSG00000226698 Gene

Products for ENSG00000226698 Gene

Sources for ENSG00000226698 Gene