Aliases for ENSG00000226609 Gene

Data sources for ENSG00000226609 Gene:

Subcategory (RNA class) for ENSG00000226609 Gene

lncRNA

Aliases for ENSG00000226609 Gene

External Ids for ENSG00000226609 Gene

Previous GeneCards Identifiers for ENSG00000226609 Gene

  • GC09M115511

Summaries for ENSG00000226609 Gene

GeneCards Summary for ENSG00000226609 Gene

ENSG00000226609 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226609 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226609 Gene

Genomics for ENSG00000226609 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000226609 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J112485 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas 9.7 +261.9 261936 6.6 ZSCAN16 TBP ZBTB10 SP1 MXD4 FEZF1 CEBPA MNT SMAD5 ETS1 C9orf147 HSALNG0073775 KIAA1958 HSDL2 INIP ENSG00000226609 SNX30 piR-39663-002
GH09J112866 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 15.5 -117.8 -117805 4.5 IKZF1 ZNF217 HOMEZ ARNT FOXA2 VEZF1 NBN SMAD4 SAP130 ZEB2 HSALNG0073791 SLC46A2 ENSG00000226609 SNX30 SLC31A2 INIP piR-55804 lnc-SLC46A2-1
GH09J112838 Enhancer 1.1 Ensembl ENCODE dbSUPER 16.1 -89.5 -89483 3.8 CEBPA HOMEZ FOXA2 SMAD4 SAP130 RARA THRB BCL6 KDM1A FOXP1 ENSG00000226609 SNX30 SLC46A2 INIP HG984071 RF00017-7834
GH09J112783 Enhancer 0.9 Ensembl ENCODE 18.9 -33.4 -33386 2 ZNF217 ELF1 CTBP1 YY1 ZNF316 PRDM10 ZNF2 MAFK INSM2 JUND SNX30 ENSG00000226609 INIP SLC46A2 piR-52680-369 RF00017-7833
GH09J112793 Enhancer 0.9 Ensembl ENCODE 17.2 -42.3 -42286 1.4 ZNF217 CTCF REST MAX VEZF1 IRF4 TRIM22 SAP130 SMC3 RAD21 ENSG00000226609 SNX30 INIP C9orf147 KIAA1958 piR-52680-369 RF00017-7833 SLC46A2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226609 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000226609 Gene

Latest Assembly
chr9:112,740,888-112,750,618
(GRCh38/hg38)
Size:
9,731 bases
Orientation:
Minus strand

Previous Assembly
chr9:115,511,182-115,512,736
(GRCh37/hg19 by Ensembl)
Size:
1,555 bases
Orientation:
Minus strand

Genomic View for ENSG00000226609 Gene

Genes around ENSG00000226609 on UCSC Golden Path with GeneCards custom track
ENSG00000226609 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000226609 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226609 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226609 Gene

Proteins for ENSG00000226609 Gene

Post-translational modifications for ENSG00000226609 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226609 Gene

Domains & Families for ENSG00000226609 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226609 Gene

Function for ENSG00000226609 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226609 Gene

Localization for ENSG00000226609 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226609 Gene

Pathways & Interactions for ENSG00000226609 Gene

PathCards logo

SuperPathways for ENSG00000226609 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226609 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000226609 Gene

Drugs & Compounds for ENSG00000226609 Gene

No Compound Related Data Available

Transcripts for ENSG00000226609 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000226609 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000504C80_9606 lncRNA 420 3

Ensembl: ENST00000440009 (view in UCSC) ,

LNCipedia: lnc-INIP-1:5,

NONCODE: NONHSAT134025.2,

URS0000EF1005_9606 lncRNA 1664 1

Ensembl: ENST00000671283 (view in UCSC) ,

URS0000D5B11E_9606 lncRNA 3832 2

LncBook: HSALNT0154155,

LNCipedia: lnc-INIP-1:1,

URS00008C0213_9606 lncRNA 1902 2

LNCipedia: lnc-INIP-1:4,

NONCODE: NONHSAT134024.2,

URS00009BBCDE_9606 lncRNA 571 2

LncBook: HSALNT0154157,

NONCODE: NONHSAT221195.1,

ENSG00000226609 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226609 Gene

No ASD Table

Relevant External Links for ENSG00000226609 Gene

GeneLoc Exon Structure for
ENSG00000226609

No data available for mRNA/cDNA for ENSG00000226609 Gene

Expression for ENSG00000226609 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000226609 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000226609 Gene

This gene is overexpressed in Testis (x6.1) and Brain - Spinal cord (cervical c-1) (x4.6).
genes like me logo Genes that share expression patterns with ENSG00000226609: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226609 Gene

Orthologs for ENSG00000226609 Gene

Evolution for ENSG00000226609 Gene

ENSEMBL:
Gene Tree for ENSG00000226609 (if available)
TreeFam:
Gene Tree for ENSG00000226609 (if available)

No data available for Orthologs for ENSG00000226609 Gene

Paralogs for ENSG00000226609 Gene

No data available for Paralogs for ENSG00000226609 Gene

Variants for ENSG00000226609 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226609 Gene

Disorders for ENSG00000226609 Gene

No disorders were found for ENSG00000226609 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226609 Gene

Publications for ENSG00000226609 Gene

No publications were found for ENSG00000226609 Gene.

No data available for Mastermind for ENSG00000226609 Gene

Products for ENSG00000226609 Gene

Sources for ENSG00000226609 Gene