Aliases for ENSG00000226454 Gene

Subcategory (RNA class) for ENSG00000226454 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000226454 Gene

  • Novel Transcript 5
  • HSALNG0049959 169
  • NONHSAG043748 94
  • Lnc-UNC5CL-2 170
  • AL033380.1 5

External Ids for ENSG00000226454 Gene

Previous GeneCards Identifiers for ENSG00000226454 Gene

  • GC06M040484
  • GC06M040678

Summaries for ENSG00000226454 Gene

GeneCards Summary for ENSG00000226454 Gene

ENSG00000226454 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226454 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226454 Gene

Genomics for ENSG00000226454 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000226454 Gene

Promoters and enhancers for ENSG00000226454 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J040524 Enhancer 0.5 Ensembl 793.9 -0.9 -938 3 SP1 POLR2A JUND YY1 ZNF143 HNF4A RXRA ZMYM3 ATF3 ENSG00000226454 LOC105375051 LRFN2 piR-39858-553
GH06J040523 Enhancer 0.2 Ensembl 788.6 +1.0 962 0.4 ENSG00000226454 LOC105375051 ENSG00000236075 LRFN2
GH06J041448 Enhancer 1.7 VISTA Ensembl ENCODE CraniofacialAtlas dbSUPER 14.6 -926.8 -926762 4.6 LCORL FOXA1 NR2F6 HLF RAD21 ZNF121 NFIB BCL6B CTCF SP1 ENSG00000237947 ENSG00000226454 USP49 FOXP4 FOXP4-AS1 MED20 FRS3 NONHSAG043766.2 lnc-TFEB-5
GH06J041318 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 14.6 -796.0 -795977 2.6 SP1 ZBTB40 CTCF MLX RBPJ SMARCE1 MIXL1 RUNX1 MYC CC2D1A HSALNG0050009 ENSG00000237947 ENSG00000226454 RNU6-250P TREM1 ADCY10P1 TREML4 NFYA TFEB NCR2
GH06J040543 Enhancer 0.4 Ensembl ENCODE 19.9 -19.1 -19138 3.8 SOX6 LRFN2 ENSG00000226454 DAAM2 LOC105375051 piR-39858-553
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226454 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000226454 Gene

Genomic Locations for ENSG00000226454 Gene
chr6:40,505,507-40,523,963
(GRCh38/hg38)
Size:
18,457 bases
Orientation:
Minus strand
chr6:40,484,075-40,491,672
(GRCh37/hg19)
Size:
7,598 bases
Orientation:
Minus strand

Genomic View for ENSG00000226454 Gene

Genes around ENSG00000226454 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000226454 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226454 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226454 Gene

Proteins for ENSG00000226454 Gene

Post-translational modifications for ENSG00000226454 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226454 Gene

Domains & Families for ENSG00000226454 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226454 Gene

Function for ENSG00000226454 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226454 Gene

Localization for ENSG00000226454 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226454 Gene

Pathways & Interactions for ENSG00000226454 Gene

PathCards logo

SuperPathways for ENSG00000226454 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226454 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000226454 Gene

Drugs & Compounds for ENSG00000226454 Gene

No Compound Related Data Available

Transcripts for ENSG00000226454 Gene

mRNA/cDNA for ENSG00000226454 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(3) RNACentral transcripts :
(1) LNCipedia transcripts :
(2) NONCODE transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226454 Gene

No ASD Table

Relevant External Links for ENSG00000226454 Gene

GeneLoc Exon Structure for
ENSG00000226454

Expression for ENSG00000226454 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000226454 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000226454 Gene

This gene is overexpressed in Testis (x51.3).
genes like me logo Genes that share expression patterns with ENSG00000226454: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226454 Gene

Orthologs for ENSG00000226454 Gene

Evolution for ENSG00000226454 Gene

ENSEMBL:
Gene Tree for ENSG00000226454 (if available)
TreeFam:
Gene Tree for ENSG00000226454 (if available)

No data available for Orthologs for ENSG00000226454 Gene

Paralogs for ENSG00000226454 Gene

No data available for Paralogs for ENSG00000226454 Gene

Variants for ENSG00000226454 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226454 Gene

Disorders for ENSG00000226454 Gene

No disorders were found for ENSG00000226454 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226454 Gene

Publications for ENSG00000226454 Gene

No publications were found for ENSG00000226454 Gene.

No data available for External Links for ENSG00000226454 Gene

Products for ENSG00000226454 Gene

Sources for ENSG00000226454 Gene