Aliases for ENSG00000226433 Gene

Subcategory (RNA class) for ENSG00000226433 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000226433 Gene

  • Novel Transcript 5
  • HSALNG0132744 169
  • NONHSAG032697 94
  • Lnc-IFNAR2-1 170
  • AP000290.1 5

External Ids for ENSG00000226433 Gene

Previous GeneCards Identifiers for ENSG00000226433 Gene

  • GC21P034528

Summaries for ENSG00000226433 Gene

GeneCards Summary for ENSG00000226433 Gene

ENSG00000226433 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226433 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226433 Gene

Genomics for ENSG00000226433 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000226433 Gene

Promoters and enhancers for ENSG00000226433 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J033152 Enhancer 0.5 FANTOM5 dbSUPER 750.6 0.0 -47 0.1 POLR2A ENSG00000226433 GART DNAJC28 NONHSAG032698.2
GH21J033323 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 14.6 +173.3 173287 4.6 ZNF785 ZBTB6 RBPJ POLR2A CTBP1 HDAC2 NR2F6 CREB1 HCFC1 MYC IFNAR1 SON PAXBP1 TMEM50B EVA1C GART CFAP298 IL10RB LINC01548 ENSG00000226433
GH21J032769 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 14.6 -381.4 -381413 4.4 FOXK2 E2F8 ZNF785 SIN3A SP1 ZBTB40 CTCF SIX5 ZBTB6 FOXA1 PAXBP1 C21orf62-AS1 SON TMEM50B CFAP298 DONSON EVA1C MIS18A-AS1 URB1 GART
GH21J033196 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.3 +50.1 50124 12.5 CTCF ZBTB6 FOXA1 CREB1 MIXL1 CC2D1A MAX RAD21 DACH1 TEAD4 SON PAXBP1 TMEM50B EVA1C GART CFAP298 URB1 DONSON IFNAR2 IFNGR2
GH21J033894 Enhancer 1 ENCODE CraniofacialAtlas 14.6 +742.3 742273 1.3 ZNF785 CTCF ZNF133 CC2D1A ZFP41 MAX RAD21 GTF2F1 MLLT1 ZSCAN21 TMEM50B FAM243A SON DONSON ATP5PO LINC01548 ENSG00000226433 CRYZL1 GART lnc-MRPS6-6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226433 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000226433 Gene

Genomic Locations for ENSG00000226433 Gene
chr21:33,152,614-33,159,110
(GRCh38/hg38)
Size:
6,497 bases
Orientation:
Plus strand
chr21:34,528,938-34,531,416
(GRCh37/hg19)
Size:
2,479 bases
Orientation:
Plus strand

Genomic View for ENSG00000226433 Gene

Genes around ENSG00000226433 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000226433 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226433 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226433 Gene

Proteins for ENSG00000226433 Gene

Post-translational modifications for ENSG00000226433 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226433 Gene

Domains & Families for ENSG00000226433 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226433 Gene

Function for ENSG00000226433 Gene

Phenotypes From GWAS Catalog for ENSG00000226433 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226433 Gene

Localization for ENSG00000226433 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226433 Gene

Pathways & Interactions for ENSG00000226433 Gene

PathCards logo

SuperPathways for ENSG00000226433 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226433 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000226433 Gene

Drugs & Compounds for ENSG00000226433 Gene

No Compound Related Data Available

Transcripts for ENSG00000226433 Gene

mRNA/cDNA for ENSG00000226433 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) LncBook transcripts :
(1) LNCipedia transcripts :
(2) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226433 Gene

No ASD Table

Relevant External Links for ENSG00000226433 Gene

GeneLoc Exon Structure for
ENSG00000226433

Expression for ENSG00000226433 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000226433 Gene

genes like me logo Genes that share expression patterns with ENSG00000226433: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226433 Gene

Orthologs for ENSG00000226433 Gene

Evolution for ENSG00000226433 Gene

ENSEMBL:
Gene Tree for ENSG00000226433 (if available)
TreeFam:
Gene Tree for ENSG00000226433 (if available)

No data available for Orthologs for ENSG00000226433 Gene

Paralogs for ENSG00000226433 Gene

No data available for Paralogs for ENSG00000226433 Gene

Variants for ENSG00000226433 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226433 Gene

Disorders for ENSG00000226433 Gene

No disorders were found for ENSG00000226433 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226433 Gene

Publications for ENSG00000226433 Gene

No publications were found for ENSG00000226433 Gene.

No data available for External Links for ENSG00000226433 Gene

Products for ENSG00000226433 Gene

Sources for ENSG00000226433 Gene