Aliases for ENSG00000226431 Gene

Subcategory (RNA class) for ENSG00000226431 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000226431 Gene

  • Novel Transcript 5
  • NONHSAG006781.2 91
  • HSALNG0080371 164
  • Lnc-PDCD11-2 165
  • AL121929.2 5

External Ids for ENSG00000226431 Gene

Previous GeneCards Identifiers for ENSG00000226431 Gene

  • GC10P105308

Summaries for ENSG00000226431 Gene

GeneCards Summary for ENSG00000226431 Gene

ENSG00000226431 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226431 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226431 Gene

Genomics for ENSG00000226431 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000226431 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J103545 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 607.4 -1.2 -1163 5.8 IKZF1 SP1 NR3C1 KLF4 ZBTB17 ZFHX2 RAD21 HNF4A RXRA MAX ENSG00000226431 NEURL1 NEURL1-AS1 BORCS7 GSTO1 CALHM2 SH3PXD2A piR-50443-049
GH10J103539 Enhancer 0.2 Ensembl 6.5 -9.1 -9063 0.4 ENSG00000226431 piR-50443-049 NEURL1 SH3PXD2A
GH10J103554 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 +7.6 7620 4.6 PRDM10 FOXA1 ZIC2 ZSCAN4 SP1 ZNF600 ZNF341 CEBPA SCRT2 MNT ARL3 ENSG00000226431 lnc-SH3PXD2A-1 NEURL1 SH3PXD2A
GH10J103541 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -6.0 -6020 2.2 CTCF ZNF692 PRDM1 ZIC2 IKZF2 TRIM22 ZNF341 ZNF561 RAD21 RELB CALHM2 GSTO1 ENSG00000226431 piR-50443-049 NEURL1 SH3PXD2A
GH10J103551 Enhancer 0.6 ENCODE dbSUPER 0.7 +2.7 2735 0.2 GATAD2B IKZF1 SPI1 ENSG00000226431 lnc-SH3PXD2A-1 NEURL1 SH3PXD2A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226431 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000226431 Gene

Genomic Locations for ENSG00000226431 Gene
chr10:103,549,064-103,550,965
(GRCh38/hg38)
Size:
1,902 bases
Orientation:
Plus strand
chr10:105,308,832-105,310,721
(GRCh37/hg19)
Size:
1,890 bases
Orientation:
Plus strand

Genomic View for ENSG00000226431 Gene

Genes around ENSG00000226431 on UCSC Golden Path with GeneCards custom track
ENSG00000226431 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000226431 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226431 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226431 Gene

Proteins for ENSG00000226431 Gene

Post-translational modifications for ENSG00000226431 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226431 Gene

Domains & Families for ENSG00000226431 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226431 Gene

Function for ENSG00000226431 Gene

Phenotypes From GWAS Catalog for ENSG00000226431 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226431 Gene

Localization for ENSG00000226431 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226431 Gene

Pathways & Interactions for ENSG00000226431 Gene

PathCards logo

SuperPathways for ENSG00000226431 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226431 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000226431 Gene

Drugs & Compounds for ENSG00000226431 Gene

No Compound Related Data Available

Transcripts for ENSG00000226431 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000226431 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004849B5_9606 lncRNA 524 3

Ensembl: ENST00000457120 (view in UCSC) ,

LNCipedia: lnc-PDCD11-2:1,

NONCODE: NONHSAT016184.2,

URS0000D5BD4C_9606 lncRNA 535 2

LncBook: HSALNT0167547,

LNCipedia: lnc-PDCD11-2:2,

URS00009BCF2E_9606 lncRNA 524 2

LncBook: HSALNT0167548,

NONCODE: NONHSAT156022.1,

ENSG00000226431 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226431 Gene

No ASD Table

Relevant External Links for ENSG00000226431 Gene

GeneLoc Exon Structure for
ENSG00000226431

No data available for mRNA/cDNA for ENSG00000226431 Gene

Expression for ENSG00000226431 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000226431 Gene

genes like me logo Genes that share expression patterns with ENSG00000226431: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226431 Gene

Orthologs for ENSG00000226431 Gene

Evolution for ENSG00000226431 Gene

ENSEMBL:
Gene Tree for ENSG00000226431 (if available)
TreeFam:
Gene Tree for ENSG00000226431 (if available)

No data available for Orthologs for ENSG00000226431 Gene

Paralogs for ENSG00000226431 Gene

No data available for Paralogs for ENSG00000226431 Gene

Variants for ENSG00000226431 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226431 Gene

Disorders for ENSG00000226431 Gene

No disorders were found for ENSG00000226431 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226431 Gene

Publications for ENSG00000226431 Gene

No publications were found for ENSG00000226431 Gene.

No data available for Mastermind for ENSG00000226431 Gene

Products for ENSG00000226431 Gene

Sources for ENSG00000226431 Gene