Aliases for ENSG00000226425 Gene

Subcategory (RNA class) for ENSG00000226425 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000226425 Gene

  • Novel Transcript 5
  • NONHSAG006539.2 91
  • HSALNG0079729 164
  • AL358613.1 5
  • Lnc-MYOF-1 165

External Ids for ENSG00000226425 Gene

Previous GeneCards Identifiers for ENSG00000226425 Gene

  • GC10M094819

Summaries for ENSG00000226425 Gene

GeneCards Summary for ENSG00000226425 Gene

ENSG00000226425 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226425 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226425 Gene

Genomics for ENSG00000226425 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000226425 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J093062 Promoter 0.6 Ensembl 600.7 -1.7 -1681 0.6 CTCF ZNF143 RAD21 ZBTB33 EZH2 ENSG00000226425 CYP26C1 ENSG00000285846 CYP26A1
GH10J093061 Promoter 0.4 Ensembl 600.7 -1.1 -1081 0.2 EZH2 ENSG00000226425 CYP26C1 ENSG00000285846 CYP26A1
GH10J092891 Enhancer 1.5 UCNEbase Ensembl ENCODE 10.7 +167.7 167720 5.4 CREB1 GATAD2A REST ZNF629 TFE3 RCOR2 ZHX2 JUND FOXA1 PRDM1 CYP26C1 ENSG00000226425 ENSG00000225118 RF00017-740 EXOC6
GH10J093287 Enhancer 1.2 Ensembl ENCODE dbSUPER 10.8 -228.0 -227958 2.5 GATAD2A CTCF TEAD4 TFE3 TARDBP FOXA1 ZNF24 REST RAD21 IRF2 CYP26C1 ENSG00000226425 PDE6C RPL17P34 lnc-RBP4-4 MYOF CYP26A1
GH10J092970 Enhancer 1.1 Ensembl ENCODE 11.4 +88.2 88219 3.6 GATAD2A LEF1 IKZF1 NFKBIZ ZNF7 JUND PRDM1 MTA2 PKNOX1 MTA1 CYP26C1 ENSG00000226425 XRCC6P1 MG828730-011 RF00017-740 EXOC6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226425 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000226425 Gene

Genomic Locations for ENSG00000226425 Gene
chr10:93,059,663-93,060,620
(GRCh38/hg38)
Size:
958 bases
Orientation:
Minus strand
chr10:94,819,420-94,820,183
(GRCh37/hg19)
Size:
764 bases
Orientation:
Minus strand

Genomic View for ENSG00000226425 Gene

Genes around ENSG00000226425 on UCSC Golden Path with GeneCards custom track
ENSG00000226425 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000226425 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226425 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226425 Gene

Proteins for ENSG00000226425 Gene

Post-translational modifications for ENSG00000226425 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226425 Gene

Domains & Families for ENSG00000226425 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226425 Gene

Function for ENSG00000226425 Gene

Phenotypes From GWAS Catalog for ENSG00000226425 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226425 Gene

Localization for ENSG00000226425 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226425 Gene

Pathways & Interactions for ENSG00000226425 Gene

PathCards logo

SuperPathways for ENSG00000226425 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226425 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000226425 Gene

Drugs & Compounds for ENSG00000226425 Gene

No Compound Related Data Available

Transcripts for ENSG00000226425 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000226425 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000088FDC_9606 lncRNA 442 4

Ensembl: ENST00000444965 (view in UCSC) ,

LncBook: HSALNT0166429,

LNCipedia: lnc-MYOF-1:1,

NONCODE: NONHSAT015675.2,

URS00008B8F4E_9606 lncRNA 520 2

LNCipedia: lnc-MYOF-1:2,

NONCODE: NONHSAT015676.2,

URS00009B5D32_9606 lncRNA 442 2

LncBook: HSALNT0166430,

NONCODE: NONHSAT157335.1,

ENSG00000226425 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226425 Gene

No ASD Table

Relevant External Links for ENSG00000226425 Gene

GeneLoc Exon Structure for
ENSG00000226425

No data available for mRNA/cDNA for ENSG00000226425 Gene

Expression for ENSG00000226425 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000226425 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000226425 Gene

This gene is overexpressed in Testis (x45.6) and Cervix - Endocervix (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000226425: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226425 Gene

Orthologs for ENSG00000226425 Gene

Evolution for ENSG00000226425 Gene

ENSEMBL:
Gene Tree for ENSG00000226425 (if available)
TreeFam:
Gene Tree for ENSG00000226425 (if available)

No data available for Orthologs for ENSG00000226425 Gene

Paralogs for ENSG00000226425 Gene

No data available for Paralogs for ENSG00000226425 Gene

Variants for ENSG00000226425 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226425 Gene

Disorders for ENSG00000226425 Gene

No disorders were found for ENSG00000226425 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226425 Gene

Publications for ENSG00000226425 Gene

No publications were found for ENSG00000226425 Gene.

No data available for Mastermind for ENSG00000226425 Gene

Products for ENSG00000226425 Gene

Sources for ENSG00000226425 Gene