Aliases for ENSG00000226423 Gene

Data sources for ENSG00000226423 Gene:

Subcategory (RNA class) for ENSG00000226423 Gene

lncRNA

Aliases for ENSG00000226423 Gene

External Ids for ENSG00000226423 Gene

Previous GeneCards Identifiers for ENSG00000226423 Gene

  • GC02M242967

Summaries for ENSG00000226423 Gene

GeneCards Summary for ENSG00000226423 Gene

ENSG00000226423 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226423 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226423 Gene

Genomics for ENSG00000226423 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000226423 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J242027 Enhancer 0.3 Ensembl 250.7 -1.0 -1024 0.4 RAD51 TOE1 ENSG00000226423 RF00017-3480 ENSG00000261186 ENSG00000223374 DTYMK ENSG00000235351 ATG4B LINC01881 FARP2 FAM240C
GH02J242020 Enhancer 0.8 Ensembl ENCODE 0.4 +5.2 5222 0.5 ZIC2 REST VEZF1 ZNF341 SMC3 RAD21 ZNF189 CTCF ELF3 TFAP4 ENSG00000226423 lnc-RTP5-7 FAM240C LINC01237
GH02J242021 Enhancer 0.5 Ensembl 0.4 +5.7 5676 0.2 ZIC2 ZNF341 ZNF189 ELF3 MBD1 ENSG00000226423 lnc-RTP5-7 FAM240C LINC01237
GH02J242011 Enhancer 0.2 FANTOM5 0.4 +14.1 14141 0.3 lnc-RTP5-7 ENSG00000226423 FAM240C LINC01237
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226423 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000226423 Gene

Latest Assembly
chr2:241,996,580-242,026,177
(GRCh38/hg38)
Size:
29,598 bases
Orientation:
Minus strand

Previous Assembly
chr2:242,967,334-242,968,327
(GRCh37/hg19 by Ensembl)
Size:
994 bases
Orientation:
Minus strand

Genomic View for ENSG00000226423 Gene

Genes around ENSG00000226423 on UCSC Golden Path with GeneCards custom track
ENSG00000226423 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000226423 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226423 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226423 Gene

Proteins for ENSG00000226423 Gene

Post-translational modifications for ENSG00000226423 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226423 Gene

Domains & Families for ENSG00000226423 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226423 Gene

Function for ENSG00000226423 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226423 Gene

Localization for ENSG00000226423 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226423 Gene

Pathways & Interactions for ENSG00000226423 Gene

PathCards logo

SuperPathways for ENSG00000226423 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226423 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000226423 Gene

Drugs & Compounds for ENSG00000226423 Gene

No Compound Related Data Available

Transcripts for ENSG00000226423 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000226423 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002C1B8E_9606 lncRNA 567 4

Ensembl: ENST00000412193 (view in UCSC) ,

LncBook: HSALNT0050047,

LNCipedia: lnc-PDCD1-16:1,

NONCODE: NONHSAT078018.2,

URS00009B663C_9606 lncRNA 784 2

LncBook: HSALNT0050045,

NONCODE: NONHSAT186556.1,

URS0001BDDDC8_9606 lncRNA 784 1

LncBook: HSALNT0050045,

URS0001BCCF25_9606 lncRNA 565 1

LncBook: HSALNT0050047,

ENSG00000226423 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226423 Gene

No ASD Table

Relevant External Links for ENSG00000226423 Gene

GeneLoc Exon Structure for
ENSG00000226423

No data available for mRNA/cDNA for ENSG00000226423 Gene

Expression for ENSG00000226423 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000226423 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000226423 Gene

This gene is overexpressed in Testis (x41.5) and Whole Blood (x4.4).
genes like me logo Genes that share expression patterns with ENSG00000226423: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226423 Gene

Orthologs for ENSG00000226423 Gene

Evolution for ENSG00000226423 Gene

ENSEMBL:
Gene Tree for ENSG00000226423 (if available)
TreeFam:
Gene Tree for ENSG00000226423 (if available)

No data available for Orthologs for ENSG00000226423 Gene

Paralogs for ENSG00000226423 Gene

No data available for Paralogs for ENSG00000226423 Gene

Variants for ENSG00000226423 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226423 Gene

Disorders for ENSG00000226423 Gene

Additional Disease Information for ENSG00000226423

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000226423 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000226423 Gene

Publications for ENSG00000226423 Gene

No publications were found for ENSG00000226423 Gene.

No data available for Mastermind for ENSG00000226423 Gene

Products for ENSG00000226423 Gene

Sources for ENSG00000226423 Gene