Aliases for ENSG00000226308 Gene

Subcategory (RNA class) for ENSG00000226308 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000226308 Gene

  • Novel Transcript 5
  • HSALNG0131150 169
  • NONHSAG032111 94
  • Lnc-SPO11-1 170
  • AL122058.1 5

External Ids for ENSG00000226308 Gene

Previous GeneCards Identifiers for ENSG00000226308 Gene

  • GC20P055841

Summaries for ENSG00000226308 Gene

GeneCards Summary for ENSG00000226308 Gene

ENSG00000226308 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000226308 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000226308 Gene

Genomics for ENSG00000226308 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000226308 Gene

Promoters and enhancers for ENSG00000226308 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J057286 Enhancer 0.8 Ensembl CraniofacialAtlas 12.1 +21.9 21876 3.9 MTA3 ZIC2 ZNF512B SMARCA5 PRDM4 BCOR GATAD2B ZNF18 GATA3 SIN3A BMP7 RPL39P39 SPO11 ENSG00000226308 PCK1 piR-55258 RF00017-3651 lnc-BMP7-2 LOC105372687
GH20J057232 Enhancer 0.7 Ensembl ENCODE 12 -34.3 -34338 1.5 POU5F1 SP1 ZSCAN4 POLR2A SCRT2 SCRT1 ZNF143 SIN3A NANOG ENSG00000226308 BMP7 lnc-MTRNR2L3-3 piR-36588-246
GH20J057294 Enhancer 0.7 Ensembl CraniofacialAtlas 12.1 +27.7 27676 1.5 MYC CTBP1 GTF2F1 ZNF157 ZKSCAN1 ESRRA ZNF217 BMP7 ENSG00000226308 RF00017-3651 piR-55258 lnc-BMP7-2 LOC105372687
GH20J057291 Enhancer 0.5 ENCODE 12.1 +24.4 24433 0.1 CTCF CTBP1 ZNF512B ZNF207 MAZ ZNF143 XRCC5 BMP7 ENSG00000226308 piR-55258 RF00017-3651 lnc-BMP7-2 LOC105372687
GH20J057221 Enhancer 0.3 ENCODE 10.9 -46.6 -46637 0.2 SCRT2 BMP7 ENSG00000226308 lnc-MTRNR2L3-3 BMP7-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226308 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000226308 Gene

Genomic Locations for ENSG00000226308 Gene
chr20:57,266,797-57,282,998
(GRCh38/hg38)
Size:
16,202 bases
Orientation:
Plus strand
chr20:55,841,853-55,858,054
(GRCh37/hg19)
Size:
16,202 bases
Orientation:
Plus strand

Genomic View for ENSG00000226308 Gene

Genes around ENSG00000226308 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000226308 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226308 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226308 Gene

Proteins for ENSG00000226308 Gene

Post-translational modifications for ENSG00000226308 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226308 Gene

Domains & Families for ENSG00000226308 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000226308 Gene

Function for ENSG00000226308 Gene

Phenotypes From GWAS Catalog for ENSG00000226308 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226308 Gene

Localization for ENSG00000226308 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226308 Gene

Pathways & Interactions for ENSG00000226308 Gene

PathCards logo

SuperPathways for ENSG00000226308 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000226308 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000226308 Gene

Drugs & Compounds for ENSG00000226308 Gene

No Compound Related Data Available

Transcripts for ENSG00000226308 Gene

mRNA/cDNA for ENSG00000226308 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(8) RNACentral transcripts :
(8) LNCipedia transcripts :
(3) NONCODE transcripts :
(3) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226308 Gene

No ASD Table

Relevant External Links for ENSG00000226308 Gene

GeneLoc Exon Structure for
ENSG00000226308

Expression for ENSG00000226308 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000226308 Gene

genes like me logo Genes that share expression patterns with ENSG00000226308: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226308 Gene

Orthologs for ENSG00000226308 Gene

Evolution for ENSG00000226308 Gene

ENSEMBL:
Gene Tree for ENSG00000226308 (if available)
TreeFam:
Gene Tree for ENSG00000226308 (if available)

No data available for Orthologs for ENSG00000226308 Gene

Paralogs for ENSG00000226308 Gene

No data available for Paralogs for ENSG00000226308 Gene

Variants for ENSG00000226308 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226308 Gene

Disorders for ENSG00000226308 Gene

No disorders were found for ENSG00000226308 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226308 Gene

Publications for ENSG00000226308 Gene

No publications were found for ENSG00000226308 Gene.

No data available for External Links for ENSG00000226308 Gene

Products for ENSG00000226308 Gene

Sources for ENSG00000226308 Gene