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Aliases for ENSG00000226172 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000226172 Gene

  • AL139420.1 5

External Ids for ENSG00000226172 Gene

Previous GeneCards Identifiers for ENSG00000226172 Gene

  • GC01M119542

Summaries for ENSG00000226172 Gene

GeneCards Summary for ENSG00000226172 Gene

ENSG00000226172 is an RNA Gene.

Additional gene information for ENSG00000226172 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000226172 Gene

Genomics for ENSG00000226172 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000226172 Gene

Promoters and enhancers for ENSG00000226172 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J119000 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 650.7 -0.1 -141 2.5 USF1 SUZ12 CEBPG FOSL1 EGR1 VEZF1 FOSL2 PRDM10 FOS EZH2 ENSG00000226172 ENSG00000239216 LOC105378933 TBX15 WARS2 GC01M119018 GC01P118982 GC01P118983
GH01J118981 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 12.3 +15.1 15145 9 BRD4 SUZ12 MAX POLR2A VEZF1 EZH2 ZNF197 L3MBTL2 NRF1 ZNF395 TBX15 WARS2 ENSG00000226172 LOC101929147 GC01P118982 GC01P118983
GH01J118958 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.8 +40.9 40888 3.8 PKNOX1 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 ATF7 RUNX3 WARS2 ENSG00000226172 LOC101929147 GC01M118978 TBX15 PIR34052
GH01J118977 Enhancer 0.4 dbSUPER 11.9 +22.2 22197 3 L3MBTL2 HMBOX1 EZH2 GC01M118978 LOC101929147 ENSG00000226172 WARS2 TBX15 PIR34052
GH01J118946 Enhancer 0.7 ENCODE dbSUPER 6.2 +53.0 52960 2.9 FOSL1 HLF CEBPA CEBPG NR2C2 WARS2 ENSG00000226172 GC01M118978 TBX15 PIR34052
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000226172 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000226172 Gene

Genomic Locations for ENSG00000226172 Gene
chr1:119,000,344-119,001,392
(GRCh38/hg38)
Size:
1,049 bases
Orientation:
Minus strand
chr1:119,542,967-119,544,015
(GRCh37/hg19)
Size:
1,049 bases
Orientation:
Minus strand

Genomic View for ENSG00000226172 Gene

Genes around ENSG00000226172 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000226172 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000226172 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000226172 Gene

Proteins for ENSG00000226172 Gene

Post-translational modifications for ENSG00000226172 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000226172 Gene

Domains & Families for ENSG00000226172 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000226172 Gene

Function for ENSG00000226172 Gene

Phenotypes From GWAS Catalog for ENSG00000226172 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000226172 Gene

Localization for ENSG00000226172 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000226172 Gene

Pathways & Interactions for ENSG00000226172 Gene

SuperPathways for ENSG00000226172 Gene

No Data Available

Interacting Proteins for ENSG00000226172 Gene

Gene Ontology (GO) - Biological Process for ENSG00000226172 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000226172 Gene

Drugs & Compounds for ENSG00000226172 Gene

No Compound Related Data Available

Transcripts for ENSG00000226172 Gene

mRNA/cDNA for ENSG00000226172 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000226172 Gene

No ASD Table

Relevant External Links for ENSG00000226172 Gene

GeneLoc Exon Structure for
ENSG00000226172

Expression for ENSG00000226172 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000226172 Gene

mRNA expression in normal human tissues for ENSG00000226172 Gene
genes like me logo Genes that share expression patterns with ENSG00000226172: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000226172 Gene

Orthologs for ENSG00000226172 Gene

Evolution for ENSG00000226172 Gene

ENSEMBL:
Gene Tree for ENSG00000226172 (if available)
TreeFam:
Gene Tree for ENSG00000226172 (if available)

No data available for Orthologs for ENSG00000226172 Gene

Paralogs for ENSG00000226172 Gene

No data available for Paralogs for ENSG00000226172 Gene

Variants for ENSG00000226172 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000226172 Gene

Disorders for ENSG00000226172 Gene

No disorders were found for ENSG00000226172 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000226172 Gene

Publications for ENSG00000226172 Gene

No publications were found for ENSG00000226172 Gene.

Products for ENSG00000226172 Gene

Sources for ENSG00000226172 Gene

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