ENSG00000225982 Gene (RNA Gene)

 

GC01P182022
GIFtS:
8
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Aliases for ENSG00000225982 Gene

Data sources for ENSG00000225982 Gene:

Subcategory (RNA class) for ENSG00000225982 Gene

lncRNA

Aliases for ENSG00000225982 Gene

External Ids for ENSG00000225982 Gene

Previous GeneCards Identifiers for ENSG00000225982 Gene

  • GC01P182055
  • GC01P182086

Summaries for ENSG00000225982 Gene

GeneCards Summary for ENSG00000225982 Gene

ENSG00000225982 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000225982 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225982 Gene

Genomics for ENSG00000225982 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for ENSG00000225982 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225982 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000225982 Gene

Latest Assembly
chr1:182,022,126-182,206,368
(GRCh38/hg38)
Size:
184,243 bases
Orientation:
Plus strand

Previous Assembly
chr1:182,055,686-182,059,247
(GRCh37/hg19 by Ensembl)
Size:
3,562 bases
Orientation:
Plus strand

Genomic View for ENSG00000225982 Gene

Genes around ENSG00000225982 on UCSC Golden Path with GeneCards custom track
ENSG00000225982 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000225982 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225982 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000225982 Gene

Proteins for ENSG00000225982 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for ENSG00000225982 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225982 Gene

Domains & Families for ENSG00000225982 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225982 Gene

Function for ENSG00000225982 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225982 Gene

Localization for ENSG00000225982 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225982 Gene

Pathways & Interactions for ENSG00000225982 Gene

PathCards logo

SuperPathways for ENSG00000225982 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000225982 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000225982 Gene

Drugs & Compounds for ENSG00000225982 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for ENSG00000225982 Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000225982 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00005EFC2A_9606 lncRNA 1145 4

Ensembl: ENST00000428646 (view in UCSC) ,

LncBook: HSALNT0018400,

LNCipedia: lnc-CACNA1E-2:1,

NONCODE: NONHSAT008304.2,

URS00009B6F1D_9606 lncRNA 1145 2

LncBook: HSALNT0018401,

NONCODE: NONHSAT150138.1,

URS0001BF9553_9606 lncRNA 4006 1

LncBook: HSALNT0018396,

URS0001BE1BA0_9606 lncRNA 3800 1

LncBook: HSALNT0018395,

URS0001BDF6BF_9606 lncRNA 3415 1

LncBook: HSALNT0018397,

ENSG00000225982 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225982 Gene

No ASD Table

Relevant External Links for ENSG00000225982 Gene

GeneLoc Exon Structure for
ENSG00000225982

No data available for mRNA/cDNA for ENSG00000225982 Gene

Expression for ENSG00000225982 Gene

Products:

  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000225982 Gene

mRNA expression in normal human tissues for ENSG00000225982 Gene
mRNA expression by GTEx for ENSG00000225982 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000225982 Gene

This gene is overexpressed in Testis (x5.2) and Cervix - Endocervix (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000225982: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225982 Gene

Orthologs for ENSG00000225982 Gene

Evolution for ENSG00000225982 Gene

ENSEMBL:
Gene Tree for ENSG00000225982 (if available)
TreeFam:
Gene Tree for ENSG00000225982 (if available)

No data available for Orthologs for ENSG00000225982 Gene

Paralogs for ENSG00000225982 Gene

No data available for Paralogs for ENSG00000225982 Gene

Variants for ENSG00000225982 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225982 Gene

Disorders for ENSG00000225982 Gene

Additional Disease Information for ENSG00000225982

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000225982 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000225982 Gene

Publications for ENSG00000225982 Gene

No publications were found for ENSG00000225982 Gene.

No data available for Mastermind for ENSG00000225982 Gene

Products for ENSG00000225982 Gene

Sources for ENSG00000225982 Gene