Aliases for ENSG00000225869 Gene

Aliases for ENSG00000225869 Gene

  • TNF Receptor-Associated Factor (TNF) Pseudogene 5
  • AC008696.1 5

External Ids for ENSG00000225869 Gene

Previous GeneCards Identifiers for ENSG00000225869 Gene

  • GC05M143131

Summaries for ENSG00000225869 Gene

GeneCards Summary for ENSG00000225869 Gene

ENSG00000225869 is a Pseudogene.

Additional gene information for ENSG00000225869 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225869 Gene

Genomics for ENSG00000225869 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000225869 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J143751 Enhancer 0.2 Ensembl 600.7 +1.2 1203 0.6 ENSG00000225869 LOC100420513 HMHB1 MIR5197 ENSG00000249881 NR3C1
GH05J143753 Enhancer 0.2 Ensembl 600.7 +0.6 603 0.2 ENSG00000225869 LOC100420513 HMHB1 MIR5197 ENSG00000249881 NR3C1
GH05J143693 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.2 +58.7 58741 2.3 GATAD2A SOX13 ZNF7 BACH1 STAT3 RXRB TCF12 IKZF2 RCOR1 TRIM22 KCTD16 MIR5197 ENSG00000225869 ENSG00000249881 HMHB1 NR3C1
GH05J143680 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 0.2 +70.4 70424 3.4 GATAD2A ZNF629 RFX1 RXRB REST CEBPA FOXK2 SOX13 RBAK RFX3 NR3C1 MIR5197 ENSG00000225869 ENSG00000249881 HMHB1
GH05J143740 Enhancer 0.5 Ensembl 0.4 +11.2 11203 1.4 IKZF2 RELB IKZF1 SPI1 TBX21 MTA2 NR3C1 YIPF5 ENSG00000225869 MIR5197 HMHB1 ENSG00000249881
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225869 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000225869 Gene

Genomic Locations for ENSG00000225869 Gene
chr5:143,752,090-143,752,704
(GRCh38/hg38)
Size:
615 bases
Orientation:
Minus strand

Genomic View for ENSG00000225869 Gene

Genes around ENSG00000225869 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225869 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225869 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225869 Gene

Proteins for ENSG00000225869 Gene

Post-translational modifications for ENSG00000225869 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225869 Gene

Domains & Families for ENSG00000225869 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225869 Gene

Function for ENSG00000225869 Gene

Phenotypes From GWAS Catalog for ENSG00000225869 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225869 Gene

Localization for ENSG00000225869 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225869 Gene

Pathways & Interactions for ENSG00000225869 Gene

PathCards logo

SuperPathways for ENSG00000225869 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000225869 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000225869 Gene

Drugs & Compounds for ENSG00000225869 Gene

No Compound Related Data Available

Transcripts for ENSG00000225869 Gene

mRNA/cDNA for ENSG00000225869 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225869 Gene

No ASD Table

Relevant External Links for ENSG00000225869 Gene

GeneLoc Exon Structure for
ENSG00000225869

Expression for ENSG00000225869 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225869 Gene

Orthologs for ENSG00000225869 Gene

Evolution for ENSG00000225869 Gene

ENSEMBL:
Gene Tree for ENSG00000225869 (if available)
TreeFam:
Gene Tree for ENSG00000225869 (if available)

No data available for Orthologs for ENSG00000225869 Gene

Paralogs for ENSG00000225869 Gene

No data available for Paralogs for ENSG00000225869 Gene

Variants for ENSG00000225869 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225869 Gene

Disorders for ENSG00000225869 Gene

No disorders were found for ENSG00000225869 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225869 Gene

Publications for ENSG00000225869 Gene

No publications were found for ENSG00000225869 Gene.

No data available for Mastermind for ENSG00000225869 Gene

Products for ENSG00000225869 Gene

Sources for ENSG00000225869 Gene