Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ENSG00000225850 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000225850 Gene

  • Novel Transcript 5
  • AL355490.1 5

External Ids for ENSG00000225850 Gene

Previous GeneCards Identifiers for ENSG00000225850 Gene

  • GC10P099094

Summaries for ENSG00000225850 Gene

GeneCards Summary for ENSG00000225850 Gene

ENSG00000225850 is an RNA Gene.

Additional gene information for ENSG00000225850 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000225850 Gene

Genomics for ENSG00000225850 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225850 Gene

Promoters and enhancers for ENSG00000225850 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J097331 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 600.7 -0.9 -923 4.9 HDGF SP1 ZNF652 ZFX ELF3 CTCF MNT SIX5 ZNF148 NKRF ENSG00000225850 FRAT2 LOC105378448 EXOSC1 NPM1P26 R3HCC1L RPL13AP5 ENSG00000230928 LOXL4 LCOR
GH10J097318 Promoter/Enhancer 1.8 Ensembl ENCODE dbSUPER 0.4 -14.6 -14565 4.4 ZNF473 SP1 ZFX ELF3 MNT NKRF ZNF121 CEBPG ZNF687 AHR FRAT1 RPL13AP5 ARHGAP19 NPM1P26 MORN4 SLIT1 EXOSC1 ENSG00000230928 LCOR LOXL4
GH10J097336 Enhancer 1 ENCODE dbSUPER 0.7 +2.8 2844 2.5 MZF1 GLIS2 ZBTB8A PRDM10 ZIC2 TARDBP CTBP1 ZNF341 KLF9 SCRT2 LOC105378448 SLIT1 R3HCC1L NPM1P26 EXOSC1 RPL13AP5 LOXL4 MARVELD1 LCOR TM9SF3
GH10J097326 Enhancer 1.2 ENCODE dbSUPER 0.4 -5.9 -5897 3.8 ZNF652 ELF3 CBFA2T2 CEBPG RERE ZSCAN21 MAFK TFE3 TRIM24 SP7 SLIT1 ENSG00000225850 FRAT1
GH10J097342 Enhancer 0.7 Ensembl 0.4 +8.8 8837 2.8 ZSCAN21 SP7 PRDM10 ZEB2 PATZ1 SCRT2 ATF2 USF1 ZBTB17 SCRT1 ARHGAP19 PGAM1 ENSG00000200737 MMS19 UBTD1 SLIT1 ENSG00000225850 LOC105378448 RPL34P20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225850 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225850 Gene

Genomic Locations for ENSG00000225850 Gene
chr10:97,334,564-97,343,203
(GRCh38/hg38)
Size:
8,640 bases
Orientation:
Plus strand
chr10:99,094,321-99,102,770
(GRCh37/hg19)
Size:
8,450 bases
Orientation:
Plus strand

Genomic View for ENSG00000225850 Gene

Genes around ENSG00000225850 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225850 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225850 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225850 Gene

Proteins for ENSG00000225850 Gene

Post-translational modifications for ENSG00000225850 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225850 Gene

Domains & Families for ENSG00000225850 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000225850 Gene

Function for ENSG00000225850 Gene

Phenotypes From GWAS Catalog for ENSG00000225850 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225850 Gene

Localization for ENSG00000225850 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225850 Gene

Pathways & Interactions for ENSG00000225850 Gene

PathCards logo

SuperPathways for ENSG00000225850 Gene

No Data Available

Interacting Proteins for ENSG00000225850 Gene

Gene Ontology (GO) - Biological Process for ENSG00000225850 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225850 Gene

Drugs & Compounds for ENSG00000225850 Gene

No Compound Related Data Available

Transcripts for ENSG00000225850 Gene

mRNA/cDNA for ENSG00000225850 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225850 Gene

No ASD Table

Relevant External Links for ENSG00000225850 Gene

GeneLoc Exon Structure for
ENSG00000225850

Expression for ENSG00000225850 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000225850 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000225850 Gene

This gene is overexpressed in Testis (x19.1) and Whole Blood (x10.2).
genes like me logo Genes that share expression patterns with ENSG00000225850: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225850 Gene

Orthologs for ENSG00000225850 Gene

Evolution for ENSG00000225850 Gene

ENSEMBL:
Gene Tree for ENSG00000225850 (if available)
TreeFam:
Gene Tree for ENSG00000225850 (if available)

No data available for Orthologs for ENSG00000225850 Gene

Paralogs for ENSG00000225850 Gene

No data available for Paralogs for ENSG00000225850 Gene

Variants for ENSG00000225850 Gene

Variation tolerance for ENSG00000225850 Gene

Gene Damage Index Score: 0.79; 16.72% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Additional Variant Information for ENSG00000225850 Gene

Disorders for ENSG00000225850 Gene

No disorders were found for ENSG00000225850 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225850 Gene

Publications for ENSG00000225850 Gene

No publications were found for ENSG00000225850 Gene.

No data available for External Links for ENSG00000225850 Gene

Products for ENSG00000225850 Gene

Sources for ENSG00000225850 Gene

Content
Loading form....