Aliases for ENSG00000225794 Gene

Subcategory (RNA class) for ENSG00000225794 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000225794 Gene

  • Novel Transcript 5
  • NONHSAG030483 94
  • Lnc-IGFBP2-1 170
  • AC073321.1 5

External Ids for ENSG00000225794 Gene

Previous GeneCards Identifiers for ENSG00000225794 Gene

  • GC02P217469

Summaries for ENSG00000225794 Gene

GeneCards Summary for ENSG00000225794 Gene

ENSG00000225794 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000225794 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225794 Gene

Genomics for ENSG00000225794 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225794 Gene

Promoters and enhancers for ENSG00000225794 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J216573 Enhancer 1.3 Ensembl ENCODE dbSUPER 12.5 -21.5 -21502 3.3 LCORL FOXA1 MLX RBPJ NR2F6 ATF1 CREB1 MIXL1 NFYC RAD21 lnc-IGFBP5-3 ENSG00000225794 LINC01280 IGFBP2 LOC105373871 NONHSAG030480.2 LOC101928180 RPL37A
GH02J216649 Enhancer 1.1 Ensembl ENCODE dbSUPER 12 +58.0 58016 6.3 NR2F1 NR2F6 ZNF652 SP1 HNF1A ZNF384 CEBPA RXRA GATAD2A RXRB LINC01280 ENSG00000225794 IGFBP5 ENSG00000236886 lnc-IGFBP2-2 IGFBP2
GH02J216565 Enhancer 0.7 Ensembl dbSUPER 12.3 -28.3 -28258 0.6 MLX ZNF644 GATAD2A SOX13 FOXA2 IKZF5 BCL6 ARID4B ETV4 TEAD3 lnc-IGFBP2-3 IGFBP2 ENSG00000225794 LINC01280 NONHSAG030480.2 lnc-IGFBP5-3 LOC105373871 LOC101928180 RPL37A
GH02J216623 Enhancer 0.5 Ensembl dbSUPER 12.1 +30.1 30140 0.7 PKNOX1 FOS ENSG00000225794 IGFBP2 piR-42491-137
GH02J216562 Enhancer 0.3 Ensembl dbSUPER 11.9 -30.8 -30758 2.4 lnc-IGFBP2-3 IGFBP2 ENSG00000225794 LINC01280 lnc-IGFBP5-3 LOC105373871 LOC101928180 RPL37A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225794 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225794 Gene

Genomic Locations for ENSG00000225794 Gene
chr2:216,594,359-216,611,206
(GRCh38/hg38)
Size:
16,848 bases
Orientation:
Plus strand
chr2:217,469,494-217,475,925
(GRCh37/hg19)
Size:
6,432 bases
Orientation:
Plus strand

Genomic View for ENSG00000225794 Gene

Genes around ENSG00000225794 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225794 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225794 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225794 Gene

Proteins for ENSG00000225794 Gene

Protein Expression for ENSG00000225794 Gene

Post-translational modifications for ENSG00000225794 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225794 Gene

Domains & Families for ENSG00000225794 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225794 Gene

Function for ENSG00000225794 Gene

Phenotypes From GWAS Catalog for ENSG00000225794 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225794 Gene

Localization for ENSG00000225794 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225794 Gene

Pathways & Interactions for ENSG00000225794 Gene

PathCards logo

SuperPathways for ENSG00000225794 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000225794 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225794 Gene

Drugs & Compounds for ENSG00000225794 Gene

No Compound Related Data Available

Transcripts for ENSG00000225794 Gene

mRNA/cDNA for ENSG00000225794 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(1) NONCODE transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225794 Gene

No ASD Table

Relevant External Links for ENSG00000225794 Gene

GeneLoc Exon Structure for
ENSG00000225794

Expression for ENSG00000225794 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000225794 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000225794 Gene

This gene is overexpressed in Liver (x11.5) and Testis (x6.0).

Protein differential expression in normal tissues from HIPED for ENSG00000225794 Gene

This gene is overexpressed in Serum (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for ENSG00000225794 Gene



Protein tissue co-expression partners for ENSG00000225794 Gene

genes like me logo Genes that share expression patterns with ENSG00000225794: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225794 Gene

Orthologs for ENSG00000225794 Gene

Evolution for ENSG00000225794 Gene

ENSEMBL:
Gene Tree for ENSG00000225794 (if available)
TreeFam:
Gene Tree for ENSG00000225794 (if available)

No data available for Orthologs for ENSG00000225794 Gene

Paralogs for ENSG00000225794 Gene

No data available for Paralogs for ENSG00000225794 Gene

Variants for ENSG00000225794 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225794 Gene

Disorders for ENSG00000225794 Gene

No disorders were found for ENSG00000225794 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225794 Gene

Publications for ENSG00000225794 Gene

No publications were found for ENSG00000225794 Gene.

No data available for External Links for ENSG00000225794 Gene

Products for ENSG00000225794 Gene

Sources for ENSG00000225794 Gene