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Aliases for ENSG00000225616 Gene

Aliases for ENSG00000225616 Gene

  • Ribosomal Protein L27 (RPL27) Pseudogene 5
  • AL138785.1 5

External Ids for ENSG00000225616 Gene

Previous GeneCards Identifiers for ENSG00000225616 Gene

  • GC01M029308

Summaries for ENSG00000225616 Gene

GeneCards Summary for ENSG00000225616 Gene

ENSG00000225616 is a Pseudogene.

Additional gene information for ENSG00000225616 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000225616 Gene

Genomics for ENSG00000225616 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225616 Gene

Promoters and enhancers for ENSG00000225616 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J028983 Promoter/Enhancer 1.3 Ensembl ENCODE 600.7 -1.3 -1270 0.9 AHR TRIM24 SP1 RXRA IKZF1 ZIC2 GATAD2A ZNF7 RXRB FOXA2 ENSG00000206704 ENSG00000225616 GC01P028986 RPL27P4 EPB41
GH01J028982 Promoter 0.8 Ensembl 600.7 +0.0 7 0.4 CEBPA NR2F2 SMAD4 RARA NR2F6 NR2F1 ENSG00000225616 RPL27P4 GC01M028891 EPB41
GH01J028913 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.2 +67.3 67251 3.7 HDGF SP1 ZNF652 ZFX MNT ZNF148 NKRF POLR2A MLLT1 ZNF687 GC01M028891 EPB41 TRNAU1AP SRSF4 SNHG12 GMEB1 PHACTR4 ENSG00000233427 YTHDF2 EYA3
GH01J028971 Enhancer 1 Ensembl ENCODE 0.4 +9.3 9307 3 ZNF121 ZNF384 ZSCAN21 MAFK SP7 SP1 PPARG CREB1 RXRA ZNF600 TMEM200B ENSG00000233427 DNAJC8 MECR PTPRU ENSG00000225616 GC01M028891 EPB41
GH01J028925 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 0.2 +54.3 54282 6.1 CC2D1A ELF3 ZKSCAN8 CBFA2T2 ZNF148 MLLT1 CEBPG GTF2F1 CSDE1 ZNF384 GMEB1 SRSF4 ENSG00000233427 EPB41 MECR PTPRU GC01M028891 ENSG00000225616
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225616 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225616 Gene

Genomic Locations for ENSG00000225616 Gene
chr1:28,982,278-28,982,608
(GRCh38/hg38)
Size:
331 bases
Orientation:
Minus strand

Genomic View for ENSG00000225616 Gene

Genes around ENSG00000225616 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225616 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225616 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225616 Gene

Proteins for ENSG00000225616 Gene

Post-translational modifications for ENSG00000225616 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225616 Gene

Domains & Families for ENSG00000225616 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000225616 Gene

Function for ENSG00000225616 Gene

Phenotypes From GWAS Catalog for ENSG00000225616 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225616 Gene

Localization for ENSG00000225616 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225616 Gene

Pathways & Interactions for ENSG00000225616 Gene

PathCards logo

SuperPathways for ENSG00000225616 Gene

No Data Available

Interacting Proteins for ENSG00000225616 Gene

Gene Ontology (GO) - Biological Process for ENSG00000225616 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225616 Gene

Drugs & Compounds for ENSG00000225616 Gene

No Compound Related Data Available

Transcripts for ENSG00000225616 Gene

mRNA/cDNA for ENSG00000225616 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225616 Gene

No ASD Table

Relevant External Links for ENSG00000225616 Gene

GeneLoc Exon Structure for
ENSG00000225616

Expression for ENSG00000225616 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225616 Gene

Orthologs for ENSG00000225616 Gene

Evolution for ENSG00000225616 Gene

ENSEMBL:
Gene Tree for ENSG00000225616 (if available)
TreeFam:
Gene Tree for ENSG00000225616 (if available)

No data available for Orthologs for ENSG00000225616 Gene

Paralogs for ENSG00000225616 Gene

No data available for Paralogs for ENSG00000225616 Gene

Variants for ENSG00000225616 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225616 Gene

Disorders for ENSG00000225616 Gene

No disorders were found for ENSG00000225616 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225616 Gene

Publications for ENSG00000225616 Gene

No publications were found for ENSG00000225616 Gene.

No data available for External Links for ENSG00000225616 Gene

Products for ENSG00000225616 Gene

Sources for ENSG00000225616 Gene

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