Aliases for ENSG00000225606 Gene

Subcategory (RNA class) for ENSG00000225606 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000225606 Gene

  • Novel Transcript 5
  • NONHSAG046960 92
  • HSALNG0056226 167
  • AC005281.1 5
  • Lnc-VWDE-2 168
  • Lnc-VWDE-1 168

External Ids for ENSG00000225606 Gene

Previous GeneCards Identifiers for ENSG00000225606 Gene

  • GC07M012609

Summaries for ENSG00000225606 Gene

GeneCards Summary for ENSG00000225606 Gene

ENSG00000225606 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000225606 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225606 Gene

Genomics for ENSG00000225606 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225606 Gene

Promoters and enhancers for ENSG00000225606 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J012570 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 500.7 +0.4 392 2.4 ZIC2 ZBTB26 POLR2A EZH2 SIN3A ZNF316 ZBTB17 FOS YY1 CEBPB SCIN ENSG00000225606
GH07J012543 Enhancer 0.9 Ensembl ENCODE 11.8 +27.1 27145 2.2 ZNF217 JUND FOS CTBP1 OSR2 BCL11A WT1 FOXA2 POLR2A FOSL2 SCIN ENSG00000225606 ENSG00000226690 piR-49655 piR-43105-587 LOC102725191
GH07J012623 Enhancer 0.7 Ensembl 11.8 -52.3 -52309 1.4 ZNF217 CTCF REST MYC RAD21 SMC3 ZNF316 ZNF592 NFE2 TAL1 ENSG00000225606 SCIN RF00017-6052 piR-46847-241
GH07J012593 Enhancer 0.7 Ensembl 11.6 -23.0 -23009 1.2 ZNF316 FOSL1 IRF2 ZNF639 MAFG DPF2 ZBTB33 SMARCA4 ZNF175 EGR2 SCIN ENSG00000225606 piR-46847-241 lnc-VWDE-7
GH07J012595 Enhancer 0.6 ENCODE 11.6 -23.9 -23859 0.2 SIN3A ESR1 GATA3 ZNF644 BHLHE40 MITF TOE1 TEAD4 ESRRA NR2C1 ENSG00000225606 SCIN piR-46847-241 lnc-VWDE-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225606 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225606 Gene

Genomic Locations for ENSG00000225606 Gene
chr7:12,570,125-12,571,392
(GRCh38/hg38)
Size:
1,268 bases
Orientation:
Minus strand
chr7:12,609,751-12,611,017
(GRCh37/hg19)
Size:
1,267 bases
Orientation:
Minus strand

Genomic View for ENSG00000225606 Gene

Genes around ENSG00000225606 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225606 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225606 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225606 Gene

Proteins for ENSG00000225606 Gene

Post-translational modifications for ENSG00000225606 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225606 Gene

Domains & Families for ENSG00000225606 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225606 Gene

Function for ENSG00000225606 Gene

Phenotypes From GWAS Catalog for ENSG00000225606 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225606 Gene

Localization for ENSG00000225606 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225606 Gene

Pathways & Interactions for ENSG00000225606 Gene

PathCards logo

SuperPathways for ENSG00000225606 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000225606 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000225606 Gene

Drugs & Compounds for ENSG00000225606 Gene

No Compound Related Data Available

Transcripts for ENSG00000225606 Gene

mRNA/cDNA for ENSG00000225606 Gene

5 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
5 NONCODE transcripts :
4 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225606 Gene

No ASD Table

Relevant External Links for ENSG00000225606 Gene

GeneLoc Exon Structure for
ENSG00000225606

Expression for ENSG00000225606 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000225606 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000225606 Gene

This gene is overexpressed in Kidney - Cortex (x9.6).
genes like me logo Genes that share expression patterns with ENSG00000225606: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225606 Gene

Orthologs for ENSG00000225606 Gene

Evolution for ENSG00000225606 Gene

ENSEMBL:
Gene Tree for ENSG00000225606 (if available)
TreeFam:
Gene Tree for ENSG00000225606 (if available)

No data available for Orthologs for ENSG00000225606 Gene

Paralogs for ENSG00000225606 Gene

No data available for Paralogs for ENSG00000225606 Gene

Variants for ENSG00000225606 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225606 Gene

Disorders for ENSG00000225606 Gene

No disorders were found for ENSG00000225606 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225606 Gene

Publications for ENSG00000225606 Gene

No publications were found for ENSG00000225606 Gene.

No data available for Mastermind for ENSG00000225606 Gene

Products for ENSG00000225606 Gene

Sources for ENSG00000225606 Gene