Aliases for ENSG00000225598 Gene

Data sources for ENSG00000225598 Gene:

Subcategory (RNA class) for ENSG00000225598 Gene

lncRNA

Aliases for ENSG00000225598 Gene

External Ids for ENSG00000225598 Gene

Previous GeneCards Identifiers for ENSG00000225598 Gene

  • GC01M080839

Summaries for ENSG00000225598 Gene

GeneCards Summary for ENSG00000225598 Gene

ENSG00000225598 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000225598 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225598 Gene

Genomics for ENSG00000225598 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000225598 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J080385 Enhancer 0.5 Ensembl 0.7 -4.0 -3978 0.2 MAFF ZNF316 MAFK MAFG ATF2 EMSY ENSG00000225598 piR-56692-002 lnc-ADGRL2-10 ADGRL2
GH01J080374 Enhancer 0.7 Ensembl ENCODE 0.4 +5.7 5731 1.6 CEBPB EP300 STAT3 ZFP37 ZNF362 ATF4 ZNF398 ZSCAN4 ZNF335 CEBPG ENSG00000225598 lnc-ADGRL4-13 lnc-ADGRL2-10 ADGRL2
GH01J080392 Enhancer 0.7 ENCODE 0.4 -11.3 -11348 0.2 ARID3A ZNF217 BRCA1 CEBPB CUX1 EP300 HES1 CTBP1 RFX5 STAT3 ENSG00000225598 piR-56692-002 lnc-ADGRL2-10 ADGRL2
GH01J080394 Enhancer 0.7 Ensembl 0.4 -11.7 -11677 0.4 ZNF217 BRCA1 CEBPB RFX5 STAT3 PRDM6 GATA3 TCF7L2 FOXA1 RAD51 ENSG00000225598 piR-56692-002 lnc-ADGRL2-10 ADGRL2
GH01J080417 Enhancer 0.7 ENCODE 0.3 -36.3 -36341 1.3 ZNF623 ZNF433 ZBTB1 REST ZNF664 ZNF19 ZBTB21 AEBP2 ZNF140 ZC3H11A piR-56692-002 ENSG00000225598 lnc-ADGRL2-10 ADGRL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225598 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000225598 Gene

Latest Assembly
chr1:80,373,234-80,381,323
(GRCh38/hg38)
Size:
8,090 bases
Orientation:
Minus strand

Previous Assembly
chr1:80,839,049-80,840,306
(GRCh37/hg19 by Ensembl)
Size:
1,258 bases
Orientation:
Minus strand

Genomic View for ENSG00000225598 Gene

Genes around ENSG00000225598 on UCSC Golden Path with GeneCards custom track
ENSG00000225598 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000225598 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225598 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225598 Gene

Proteins for ENSG00000225598 Gene

Post-translational modifications for ENSG00000225598 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225598 Gene

Domains & Families for ENSG00000225598 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225598 Gene

Function for ENSG00000225598 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225598 Gene

Localization for ENSG00000225598 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225598 Gene

Pathways & Interactions for ENSG00000225598 Gene

PathCards logo

SuperPathways for ENSG00000225598 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000225598 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000225598 Gene

Drugs & Compounds for ENSG00000225598 Gene

No Compound Related Data Available

Transcripts for ENSG00000225598 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000225598 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004E0CB1_9606 lncRNA 582 4

Ensembl: ENST00000458146 (view in UCSC) ,

LncBook: HSALNT0009392,

LNCipedia: lnc-ADGRL4-7:1,

NONCODE: NONHSAT004112.2,

URS0001BCEC64_9606 lncRNA 1032 1

LncBook: HSALNT0009391,

URS0001BD762C_9606 lncRNA 880 1

LncBook: HSALNT0009390,

URS00009B134B_9606 lncRNA 582 1

NONCODE: NONHSAT151811.1,

URS0001BD86A5_9606 lncRNA 580 1

LncBook: HSALNT0009392,

ENSG00000225598 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225598 Gene

No ASD Table

Relevant External Links for ENSG00000225598 Gene

GeneLoc Exon Structure for
ENSG00000225598

No data available for mRNA/cDNA for ENSG00000225598 Gene

Expression for ENSG00000225598 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000225598 Gene

genes like me logo Genes that share expression patterns with ENSG00000225598: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225598 Gene

Orthologs for ENSG00000225598 Gene

Evolution for ENSG00000225598 Gene

ENSEMBL:
Gene Tree for ENSG00000225598 (if available)
TreeFam:
Gene Tree for ENSG00000225598 (if available)

No data available for Orthologs for ENSG00000225598 Gene

Paralogs for ENSG00000225598 Gene

No data available for Paralogs for ENSG00000225598 Gene

Variants for ENSG00000225598 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225598 Gene

Disorders for ENSG00000225598 Gene

No disorders were found for ENSG00000225598 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225598 Gene

Publications for ENSG00000225598 Gene

No publications were found for ENSG00000225598 Gene.

No data available for Mastermind for ENSG00000225598 Gene

Products for ENSG00000225598 Gene

Sources for ENSG00000225598 Gene