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ENSG00000225330 Gene(RNA Gene)

 

GCID:
GC21P039630
GIFtS:
7
Genes Participants
UDN Logo

Aliases for ENSG00000225330 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000225330 Gene

  • Novel Transcript, Sense Overlapping B3GALT5 5
  • AF064860.1 5

External Ids for ENSG00000225330 Gene

Previous GeneCards Identifiers for ENSG00000225330 Gene

  • GC21P041002

Summaries for ENSG00000225330 Gene

GeneCards Summary for ENSG00000225330 Gene

ENSG00000225330 is an RNA Gene.

Additional gene information for ENSG00000225330 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000225330 Gene

Genomics for ENSG00000225330 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225330 Gene

Promoters and enhancers for ENSG00000225330 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH21J039628 Enhancer 0.6 Ensembl ENCODE 600.7 -1.6 -1570 0.6 NCOA3 CREB1 ZNF354B ENSG00000225330 B3GALT5-AS1 HMGN1 B3GALT5
GH21J039630 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +2.3 2262 5.1 CREB1 ZNF692 SP1 JUND FOS FOSL2 SIN3A CTCF JUN GC21P039633 B3GALT5-AS1 B3GALT5 ENSG00000225330
GH21J039636 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +7.6 7630 3.8 ZNF512 ZIC2 CTBP1 ZNF512B ZBTB48 PKNOX1 POLR2A ZFHX2 FOXA1 ZNF366 B3GALT5-AS1 B3GALT5 IGSF5 SH3BGR GC21P039633 ENSG00000225330 PIR55330
GH21J039643 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +12.8 12830 4.6 PKNOX1 ZNF189 FOXA1 B3GALT5-AS1 IGSF5 GC21P039633 ENSG00000225330 PIR55330 B3GALT5
GH21J039673 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +45.3 45330 4 SP1 CREB1 POLR2A CTBP1 MNT SCRT2 RUNX3 ESRRA FOXA2 BCL11A B3GALT5 B3GALT5-AS1 SH3BGR PIR55330 ENSG00000225330 IGSF5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225330 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225330 Gene

Genomic Locations for ENSG00000225330 Gene
chr21:39,630,271-39,726,085
(GRCh38/hg38)
Size:
95,815 bases
Orientation:
Plus strand
chr21:41,002,198-41,098,012
(GRCh37/hg19)
Size:
95,815 bases
Orientation:
Plus strand

Genomic View for ENSG00000225330 Gene

Genes around ENSG00000225330 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225330 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225330 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000225330 Gene

Proteins for ENSG00000225330 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000225330 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225330 Gene

Domains & Families for ENSG00000225330 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000225330 Gene

Function for ENSG00000225330 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000225330 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225330 Gene

Localization for ENSG00000225330 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225330 Gene

Pathways & Interactions for ENSG00000225330 Gene

GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
PathCards logo

SuperPathways for ENSG00000225330 Gene

No Data Available

Interacting Proteins for ENSG00000225330 Gene

Gene Ontology (GO) - Biological Process for ENSG00000225330 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225330 Gene

Drugs & Compounds for ENSG00000225330 Gene

Products:

  1. Drug
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
No Compound Related Data Available

Transcripts for ENSG00000225330 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000225330 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225330 Gene

No ASD Table

Relevant External Links for ENSG00000225330 Gene

GeneLoc Exon Structure for
ENSG00000225330

Expression for ENSG00000225330 Gene

Products:

  1. Primer
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000225330 Gene

mRNA expression in normal human tissues for ENSG00000225330 Gene
mRNA expression by GTEx for ENSG00000225330 Gene
genes like me logo Genes that share expression patterns with ENSG00000225330: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225330 Gene

Orthologs for ENSG00000225330 Gene

Evolution for ENSG00000225330 Gene

ENSEMBL:
Gene Tree for ENSG00000225330 (if available)
TreeFam:
Gene Tree for ENSG00000225330 (if available)

No data available for Orthologs for ENSG00000225330 Gene

Paralogs for ENSG00000225330 Gene

No data available for Paralogs for ENSG00000225330 Gene

Variants for ENSG00000225330 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225330 Gene

Disorders for ENSG00000225330 Gene

No disorders were found for ENSG00000225330 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225330 Gene

Publications for ENSG00000225330 Gene

No publications were found for ENSG00000225330 Gene.

No data available for External Links for ENSG00000225330 Gene

Products for ENSG00000225330 Gene

Sources for ENSG00000225330 Gene

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