Aliases for ENSG00000225313 Gene

Subcategory (RNA class) for ENSG00000225313 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000225313 Gene

  • Novel Transcript 5
  • HSALNG0002394 167
  • NONHSAG000981 92
  • Lnc-ZNF362-1 168
  • AL513327.1 5

External Ids for ENSG00000225313 Gene

Previous GeneCards Identifiers for ENSG00000225313 Gene

  • GC01P033780

Summaries for ENSG00000225313 Gene

GeneCards Summary for ENSG00000225313 Gene

ENSG00000225313 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000225313 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225313 Gene

Genomics for ENSG00000225313 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225313 Gene

Promoters and enhancers for ENSG00000225313 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J033306 Promoter 0.6 Ensembl 500.7 -0.3 -348 1.2 EZH2 RNF2 PCBP1 HNRNPK SUZ12 BACH1 ENSG00000225313 piR-54764-022 RF00017-154 A3GALT2
GH01J033337 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 12.7 +36.9 36881 14.1 EP300 FOXK2 ZBTB40 ZSCAN5C SIN3A NRF1 TCF12 POLR2G NCOR1 GTF2E2 PHC2 A3GALT2 ENSG00000225313 S100PBP TRIM62 AK2 RNF19B PHC2-AS1 RN7SKP16 lnc-A3GALT2-5
GH01J033330 Enhancer 0.9 ENCODE dbSUPER 12.8 +25.5 25489 5.6 POLR2G NCOR1 NR2F2 POLR2A SAP130 RBM22 SPI1 JUND CREM STAT3 MIR3605 PHC2 A3GALT2 ENSG00000225313 TRIM62 RN7SKP16 lnc-A3GALT2-5
GH01J033269 Enhancer 0.6 Ensembl 11.6 -39.4 -39387 4.1 ZNF623 RBM25 SMARCA5 ZMYM3 KLF17 CHD4 GLIS1 ZNF398 KDM1A ZNF16 A3GALT2 RBBP4 ZBTB8A ENSG00000225313 ZSCAN20 TRIM62 PHC2 ENSG00000270115 ZNF362 lnc-AZIN2-6
GH01J033263 Enhancer 0.5 Ensembl 11.3 -42.8 -42848 2.2 POLR2G ZNF341 RBM25 POLR2A ZNF664 GLIS1 KDM1A AGO2 ENSG00000225313 A3GALT2 TRIM62 PHC2 ENSG00000270115 ZNF362 lnc-AZIN2-6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225313 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225313 Gene

Genomic Locations for ENSG00000225313 Gene
chr1:33,307,348-33,349,245
(GRCh38/hg38)
Size:
41,898 bases
Orientation:
Plus strand
chr1:33,772,967-33,791,644
(GRCh37/hg19)
Size:
18,678 bases
Orientation:
Plus strand

Genomic View for ENSG00000225313 Gene

Genes around ENSG00000225313 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225313 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225313 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225313 Gene

Proteins for ENSG00000225313 Gene

Post-translational modifications for ENSG00000225313 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225313 Gene

Domains & Families for ENSG00000225313 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225313 Gene

Function for ENSG00000225313 Gene

Phenotypes From GWAS Catalog for ENSG00000225313 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225313 Gene

Localization for ENSG00000225313 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225313 Gene

Pathways & Interactions for ENSG00000225313 Gene

PathCards logo

SuperPathways for ENSG00000225313 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000225313 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000225313 Gene

Drugs & Compounds for ENSG00000225313 Gene

No Compound Related Data Available

Transcripts for ENSG00000225313 Gene

mRNA/cDNA for ENSG00000225313 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225313 Gene

No ASD Table

Relevant External Links for ENSG00000225313 Gene

GeneLoc Exon Structure for
ENSG00000225313

Expression for ENSG00000225313 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000225313 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000225313 Gene

This gene is overexpressed in Whole Blood (x15.0).
genes like me logo Genes that share expression patterns with ENSG00000225313: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225313 Gene

Orthologs for ENSG00000225313 Gene

Evolution for ENSG00000225313 Gene

ENSEMBL:
Gene Tree for ENSG00000225313 (if available)
TreeFam:
Gene Tree for ENSG00000225313 (if available)

No data available for Orthologs for ENSG00000225313 Gene

Paralogs for ENSG00000225313 Gene

No data available for Paralogs for ENSG00000225313 Gene

Variants for ENSG00000225313 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225313 Gene

Disorders for ENSG00000225313 Gene

No disorders were found for ENSG00000225313 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225313 Gene

Publications for ENSG00000225313 Gene

No publications were found for ENSG00000225313 Gene.

No data available for Mastermind for ENSG00000225313 Gene

Products for ENSG00000225313 Gene

Sources for ENSG00000225313 Gene