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Aliases for ENSG00000225300 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000225300 Gene

  • Novel Transcript 5
  • AL591623.1 5

External Ids for ENSG00000225300 Gene

Previous GeneCards Identifiers for ENSG00000225300 Gene

  • GC01P246769

Summaries for ENSG00000225300 Gene

GeneCards Summary for ENSG00000225300 Gene

ENSG00000225300 is an RNA Gene.

Additional gene information for ENSG00000225300 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000225300 Gene

Genomics for ENSG00000225300 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225300 Gene

Promoters and enhancers for ENSG00000225300 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J246575 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 6.8 -24.9 -24850 10.2 CC2D1A ELF3 ZKSCAN8 CBFA2T2 MLLT1 CEBPG RERE GTF2F1 CSDE1 BACH1 CNST SMYD3 ENSG00000225300 ZNF669 TFB2M LOC105373271
GH01J246586 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 6.7 -17.9 -17937 2 ZKSCAN8 PPARG RXRA ZNF512 CEBPA GATAD2A GTF2E2 RXRB PKNOX1 SOX13 CNST TFB2M ENSG00000225300 LOC105373271
GH01J246631 Enhancer 0.8 Ensembl ENCODE 7.5 +26.7 26702 3.1 NFE2 MAFG CEBPG CEBPB JUND ZBTB33 HLF SREBF1 EMSY ENSG00000228955 ENSG00000225300 SCCPDH PIR55054 CNST
GH01J246676 Enhancer 0.8 Ensembl ENCODE 5 +71.8 71787 1.8 SP7 PKNOX1 ZNF629 TCF7L2 WT1 ZNF366 FEZF1 ZNF843 PRDM6 LINC01341 KIF28P ENSG00000260698 ENSG00000225300 LOC102724382 GC01M246668
GH01J246630 Enhancer 0.5 Ensembl 6.5 +24.1 24128 0.4 PKNOX1 JUNB IRF4 BATF ENSG00000225300 SCCPDH ENSG00000228955 LOC105373271 CNST
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225300 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225300 Gene

Genomic Locations for ENSG00000225300 Gene
chr1:246,605,873-246,608,102
(GRCh38/hg38)
Size:
2,230 bases
Orientation:
Plus strand
chr1:246,769,175-246,771,404
(GRCh37/hg19)
Size:
2,230 bases
Orientation:
Plus strand

Genomic View for ENSG00000225300 Gene

Genes around ENSG00000225300 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225300 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225300 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225300 Gene

Proteins for ENSG00000225300 Gene

Post-translational modifications for ENSG00000225300 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225300 Gene

Domains & Families for ENSG00000225300 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000225300 Gene

Function for ENSG00000225300 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225300 Gene

Localization for ENSG00000225300 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225300 Gene

Pathways & Interactions for ENSG00000225300 Gene

PathCards logo

SuperPathways for ENSG00000225300 Gene

No Data Available

Interacting Proteins for ENSG00000225300 Gene

Gene Ontology (GO) - Biological Process for ENSG00000225300 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225300 Gene

Drugs & Compounds for ENSG00000225300 Gene

No Compound Related Data Available

Transcripts for ENSG00000225300 Gene

mRNA/cDNA for ENSG00000225300 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225300 Gene

No ASD Table

Relevant External Links for ENSG00000225300 Gene

GeneLoc Exon Structure for
ENSG00000225300

Expression for ENSG00000225300 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225300 Gene

Orthologs for ENSG00000225300 Gene

Evolution for ENSG00000225300 Gene

ENSEMBL:
Gene Tree for ENSG00000225300 (if available)
TreeFam:
Gene Tree for ENSG00000225300 (if available)

No data available for Orthologs for ENSG00000225300 Gene

Paralogs for ENSG00000225300 Gene

No data available for Paralogs for ENSG00000225300 Gene

Variants for ENSG00000225300 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225300 Gene

Disorders for ENSG00000225300 Gene

No disorders were found for ENSG00000225300 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225300 Gene

Publications for ENSG00000225300 Gene

No publications were found for ENSG00000225300 Gene.

No data available for External Links for ENSG00000225300 Gene

Products for ENSG00000225300 Gene

Sources for ENSG00000225300 Gene

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