Aliases for ENSG00000225243 Gene

Subcategory (RNA class) for ENSG00000225243 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000225243 Gene

  • Novel Transcript, Antisense To FMO2 5
  • NONHSAG003441 94
  • HSALNG0008404 169
  • AL021026.1 5
  • Lnc-MYOC-1 170

External Ids for ENSG00000225243 Gene

Summaries for ENSG00000225243 Gene

GeneCards Summary for ENSG00000225243 Gene

ENSG00000225243 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000225243 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000225243 Gene

Genomics for ENSG00000225243 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225243 Gene

Promoters and enhancers for ENSG00000225243 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J171217 Promoter/Enhancer 1.2 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.4 +7.5 7527 4.7 SP1 PRDM1 POLR2A RUNX3 ETS1 FMO2 ENSG00000231424 FMO3 MROH9 ENSG00000225243 LOC105371611
GH01J171209 Enhancer 0.8 Ensembl ENCODE 0.4 +16.1 16063 5.4 FOXA1 RAD21 SP1 RXRA FOXA2 CTCF JUND USF1 ZBTB33 GATA3 FMO2 FMO3 ENSG00000225243 LOC105371611 ENSG00000231424
GH01J171185 Promoter/Enhancer 1 EPDnew FANTOM5 Ensembl 0.3 +40.9 40887 3.4 CTCF RFX5 FMO2 FMO3 ENSG00000225243 ENSG00000231424 LOC105371611
GH01J171194 Enhancer 0.6 ENCODE 0.3 +31.9 31868 1.9 MLX ELF3 SP1 CEBPA FOXA2 TCF7 JUND HHEX TEAD1 RAD21 FMO2 FMO3 ENSG00000225243 ENSG00000231424 LOC105371611
GH01J171207 Enhancer 0.4 Ensembl 0.3 +20.3 20287 0.2 MIXL1 SP1 RXRA HNF4A FMO2 ENSG00000225243 LOC105371611 ENSG00000231424
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225243 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225243 Gene

Genomic Locations for ENSG00000225243 Gene
chr1:171,199,244-171,227,788
(GRCh38/hg38)
Size:
28,545 bases
Orientation:
Minus strand
chr1:171,168,383-171,196,927
(GRCh37/hg19)
Size:
28,545 bases
Orientation:
Minus strand

Genomic View for ENSG00000225243 Gene

Genes around ENSG00000225243 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225243 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225243 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225243 Gene

Proteins for ENSG00000225243 Gene

Post-translational modifications for ENSG00000225243 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225243 Gene

Domains & Families for ENSG00000225243 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000225243 Gene

Function for ENSG00000225243 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225243 Gene

Localization for ENSG00000225243 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225243 Gene

Pathways & Interactions for ENSG00000225243 Gene

PathCards logo

SuperPathways for ENSG00000225243 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000225243 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225243 Gene

Drugs & Compounds for ENSG00000225243 Gene

No Compound Related Data Available

Transcripts for ENSG00000225243 Gene

mRNA/cDNA for ENSG00000225243 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(5) RNACentral transcripts :
(5) NONCODE transcripts :
(3) LNCipedia transcripts :
(3) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225243 Gene

No ASD Table

Relevant External Links for ENSG00000225243 Gene

GeneLoc Exon Structure for
ENSG00000225243

Expression for ENSG00000225243 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000225243 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000225243 Gene

This gene is overexpressed in Artery - Aorta (x7.1) and Lung (x5.1).
genes like me logo Genes that share expression patterns with ENSG00000225243: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225243 Gene

Orthologs for ENSG00000225243 Gene

Evolution for ENSG00000225243 Gene

ENSEMBL:
Gene Tree for ENSG00000225243 (if available)
TreeFam:
Gene Tree for ENSG00000225243 (if available)

No data available for Orthologs for ENSG00000225243 Gene

Paralogs for ENSG00000225243 Gene

No data available for Paralogs for ENSG00000225243 Gene

Variants for ENSG00000225243 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225243 Gene

Disorders for ENSG00000225243 Gene

No disorders were found for ENSG00000225243 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225243 Gene

Publications for ENSG00000225243 Gene

No publications were found for ENSG00000225243 Gene.

No data available for External Links for ENSG00000225243 Gene

Products for ENSG00000225243 Gene

Sources for ENSG00000225243 Gene