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Aliases for ENSG00000225230 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000225230 Gene

  • Novel Transcript 5
  • AC008937.1 5

External Ids for ENSG00000225230 Gene

Previous GeneCards Identifiers for ENSG00000225230 Gene

  • GC05M056195

Summaries for ENSG00000225230 Gene

GeneCards Summary for ENSG00000225230 Gene

ENSG00000225230 is an RNA Gene.

Additional gene information for ENSG00000225230 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000225230 Gene

Genomics for ENSG00000225230 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225230 Gene

Promoters and enhancers for ENSG00000225230 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J056908 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 600.7 +1.2 1164 3.5 SP1 ZFX ZNF148 NKRF POLR2A CSDE1 ZNF687 ZSCAN21 TFE3 NCOA6 SETD9 ENSG00000225230 LOC105378980 MIER3 ENSG00000271828 GPBP1
GH05J056911 Promoter/Enhancer 0.7 Ensembl dbSUPER 600.7 -0.8 -787 0.2 ENSG00000225230 LOC105378980 SETD9 ENSG00000271828
GH05J056950 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 11.4 -40.7 -40687 3.2 ZFX NKRF ZNF687 NCOA6 ZBTB7A POLR2A SP5 PRDM1 ZNF639 GLIS2 MIER3 SETD9 ENSG00000225230 ENSG00000235635
GH05J057031 Enhancer 1 Ensembl ENCODE 11.1 -122.2 -122167 3 MAFK MYC ZNF644 FOSL2 ZNF512 ZIC2 CTBP1 SMARCC1 SMARCC2 MNT ENSG00000225230 SETD9 GC05P057021 ENSG00000248652
GH05J056848 Enhancer 0.8 ENCODE dbSUPER 10.2 +59.6 59619 4 CEBPG ZNF644 RXRA CEBPA CEBPB KDM1A HNF4A BCL6B SETD9 MAP3K1 ENSG00000225230 LINC01948 ENSG00000235635 MIER3 C5orf67 GC05P056845 GC05P056846 ENSG00000237705
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225230 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225230 Gene

Genomic Locations for ENSG00000225230 Gene
chr5:56,900,041-56,910,714
(GRCh38/hg38)
Size:
10,674 bases
Orientation:
Minus strand
chr5:56,195,868-56,206,541
(GRCh37/hg19)
Size:
10,674 bases
Orientation:
Minus strand

Genomic View for ENSG00000225230 Gene

Genes around ENSG00000225230 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225230 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225230 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000225230 Gene

Proteins for ENSG00000225230 Gene

Post-translational modifications for ENSG00000225230 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225230 Gene

Domains & Families for ENSG00000225230 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000225230 Gene

Function for ENSG00000225230 Gene

Phenotypes From GWAS Catalog for ENSG00000225230 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225230 Gene

Localization for ENSG00000225230 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225230 Gene

Pathways & Interactions for ENSG00000225230 Gene

PathCards logo

SuperPathways for ENSG00000225230 Gene

No Data Available

Interacting Proteins for ENSG00000225230 Gene

Gene Ontology (GO) - Biological Process for ENSG00000225230 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225230 Gene

Drugs & Compounds for ENSG00000225230 Gene

No Compound Related Data Available

Transcripts for ENSG00000225230 Gene

mRNA/cDNA for ENSG00000225230 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225230 Gene

No ASD Table

Relevant External Links for ENSG00000225230 Gene

GeneLoc Exon Structure for
ENSG00000225230

Expression for ENSG00000225230 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000225230 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000225230 Gene

This gene is overexpressed in Testis (x11.8).
genes like me logo Genes that share expression patterns with ENSG00000225230: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225230 Gene

Orthologs for ENSG00000225230 Gene

Evolution for ENSG00000225230 Gene

ENSEMBL:
Gene Tree for ENSG00000225230 (if available)
TreeFam:
Gene Tree for ENSG00000225230 (if available)

No data available for Orthologs for ENSG00000225230 Gene

Paralogs for ENSG00000225230 Gene

No data available for Paralogs for ENSG00000225230 Gene

Variants for ENSG00000225230 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225230 Gene

Disorders for ENSG00000225230 Gene

No disorders were found for ENSG00000225230 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225230 Gene

Publications for ENSG00000225230 Gene

No publications were found for ENSG00000225230 Gene.

No data available for External Links for ENSG00000225230 Gene

Products for ENSG00000225230 Gene

Sources for ENSG00000225230 Gene

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