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Aliases for ENSG00000225183 Gene

Subcategory (RNA class) for ENSG00000225183 Gene

lncRNA

Aliases for ENSG00000225183 Gene

  • Cytochrome C Oxidase Subunit VIIb (COX7B) Pseudogene 5
  • AL353898.1 5

External Ids for ENSG00000225183 Gene

ORGUL Members for ENSG00000225183 Gene

Previous GeneCards Identifiers for ENSG00000225183 Gene

  • GC01P054555

Summaries for ENSG00000225183 Gene

GeneCards Summary for ENSG00000225183 Gene

ENSG00000225183 is a Pseudogene, and is affiliated with the lncRNA class.

fRNAdb sequence ontologies for ENSG00000225183 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for ENSG00000225183

Additional gene information for ENSG00000225183 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000225183 Gene

Genomics for ENSG00000225183 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000225183 Gene

Promoters and enhancers for ENSG00000225183 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J054091 Enhancer 0.2 Ensembl 600.7 +1.9 1945 0.8 ENSG00000225183 TCEANC2 TMEM59 TTC22 ENSG00000237453 ENSG00000279049
GH01J054093 Enhancer 0.7 ENCODE 0.4 +5.8 5750 3.5 ELF3 ZNF121 SP1 FOXA2 GABPA NR2C2 NR2F2 HNF4A CEBPB HOMEZ TCEANC2 LDLRAD1 TMEM59 CDCP2 SSBP3-AS1 MRPL37 ENSG00000279049 ENSG00000225183
GH01J054098 Enhancer 0.3 Ensembl 0.4 +9.5 9545 1.6 ZNF316 ENSG00000279049 TCEANC2 CDCP2 TMEM59 SSBP3-AS1 ENSG00000225183
GH01J054097 Enhancer 0.2 Ensembl 0.4 +7.6 7645 0.2 LDLRAD1 TCEANC2 TMEM59 CDCP2 ENSG00000279049 ENSG00000225183
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000225183 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000225183 Gene

Genomic Locations for ENSG00000225183 Gene
chr1:54,089,856-54,090,093
(GRCh38/hg38)
Size:
238 bases
Orientation:
Plus strand

Genomic View for ENSG00000225183 Gene

Genes around ENSG00000225183 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000225183 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000225183 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for ENSG00000225183 Gene

ORGUL Member Location for ENSG00000225183 gene

No data available for RefSeq DNA sequence for ENSG00000225183 Gene

Proteins for ENSG00000225183 Gene

Post-translational modifications for ENSG00000225183 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000225183 Gene

Domains & Families for ENSG00000225183 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000225183 Gene

Function for ENSG00000225183 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000225183 Gene

Localization for ENSG00000225183 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000225183 Gene

Pathways & Interactions for ENSG00000225183 Gene

PathCards logo

SuperPathways for ENSG00000225183 Gene

No Data Available

Interacting Proteins for ENSG00000225183 Gene

Gene Ontology (GO) - Biological Process for ENSG00000225183 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000225183 Gene

Drugs & Compounds for ENSG00000225183 Gene

No Compound Related Data Available

Transcripts for ENSG00000225183 Gene

fRNAdb Secondary structures for ENSG00000225183 Gene

  • FR249686

mRNA/cDNA for ENSG00000225183 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000225183 Gene

No ASD Table

Relevant External Links for ENSG00000225183 Gene

GeneLoc Exon Structure for
ENSG00000225183

Expression for ENSG00000225183 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000225183 Gene

Orthologs for ENSG00000225183 Gene

Evolution for ENSG00000225183 Gene

ENSEMBL:
Gene Tree for ENSG00000225183 (if available)
TreeFam:
Gene Tree for ENSG00000225183 (if available)

No data available for Orthologs for ENSG00000225183 Gene

Paralogs for ENSG00000225183 Gene

No data available for Paralogs for ENSG00000225183 Gene

Variants for ENSG00000225183 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000225183 Gene

Disorders for ENSG00000225183 Gene

No disorders were found for ENSG00000225183 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000225183 Gene

Publications for ENSG00000225183 Gene

  1. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  2. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

No data available for External Links for ENSG00000225183 Gene

Products for ENSG00000225183 Gene

Sources for ENSG00000225183 Gene

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